Gm16306 MGI Mouse Gene Detail - MGI:3826555

Sequence Map

Chr7:6402053-6402635 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3826555	lncRNA gene	Chr7:6402053-6402635 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037071	sense intronic lncRNA gene	Chr7:3486499-3487081 (+)
A/J	MGP_AJ_G0037059	sense intronic lncRNA gene	Chr7:3386260-3386842 (+)
AKR/J	MGP_AKRJ_G0037007	sense intronic lncRNA gene	Chr7:3613637-3614219 (+)
BALB/cJ	MGP_BALBcJ_G0037050	sense intronic lncRNA gene	Chr7:3492168-3492750 (+)
C3H/HeJ	MGP_C3HHeJ_G0036737	sense intronic lncRNA gene	Chr7:3465800-3466382 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037562	sense intronic lncRNA gene	Chr7:3686423-3687005 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034607	sense intronic lncRNA gene	Chr7:3081723-3082321 (+)
CAST/EiJ	MGP_CASTEiJ_G0035924	sense intronic lncRNA gene	Chr7:3359306-3359854 (+)
CBA/J	MGP_CBAJ_G0036712	sense intronic lncRNA gene	Chr7:3797299-3797881 (+)
DBA/2J	MGP_DBA2J_G0036887	sense intronic lncRNA gene	Chr7:3409937-3410519 (+)
FVB/NJ	MGP_FVBNJ_G0036837	sense intronic lncRNA gene	Chr7:3405651-3406234 (+)
LP/J	MGP_LPJ_G0036934	sense intronic lncRNA gene	Chr7:3593149-3593731 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036844	sense intronic lncRNA gene	Chr7:3783744-3784326 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037680	sense intronic lncRNA gene	Chr7:3417990-3418572 (+)
PWK/PhJ	MGP_PWKPhJ_G0035617	sense intronic lncRNA gene	Chr7:3595308-3595891 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035426	sense intronic lncRNA gene	Chr7:2999462-3000039 (+)
WSB/EiJ	MGP_WSBEiJ_G0036125	sense intronic lncRNA gene	Chr7:3561368-3562593 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000089780	Ensembl Gene Model \| MGI Sequence Detail	583	C57BL/6J	± kb
	transcript	ENSMUST00000160568	Ensembl \| MGI Sequence Detail	176	Not Applicable

Summaries

All 4
Earliest

J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
Latest

J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm16306:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr64449	Chr7:6401697-6401728 (+)	-340 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 10/22/2024 MGI 6.24