Gm16307 Pseudogene Detail

Summary

• Symbol
  Gm16307
• Name
  predicted gene 16307

• Feature Type
  pseudogene
• IDs
  MGI:3826556
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:6408174-6408383 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 3.71 cM

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3826556	pseudogene	Chr7:6408174-6408383 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013802	pseudogene	Chr7:3496741-3496950 (-)
A/J	MGP_AJ_G0013797	pseudogene	Chr7:3393026-3393235 (-)
AKR/J	MGP_AKRJ_G0013748	pseudogene	Chr7:3622849-3623058 (-)
BALB/cJ	MGP_BALBcJ_G0013780	pseudogene	Chr7:3498289-3498498 (-)
C3H/HeJ	MGP_C3HHeJ_G0013606	pseudogene	Chr7:3471831-3472040 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014173	pseudogene	Chr7:3692375-3692584 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012105	pseudogene	Chr7:3088004-3088213 (-)
CAST/EiJ	MGP_CASTEiJ_G0013287	pseudogene	Chr7:3366421-3366630 (-)
CBA/J	MGP_CBAJ_G0013583	pseudogene	Chr7:3805465-3805674 (-)
DBA/2J	MGP_DBA2J_G0013664	pseudogene	Chr7:3416107-3416316 (-)
FVB/NJ	MGP_FVBNJ_G0013663	pseudogene	Chr7:3414079-3414288 (-)
LP/J	MGP_LPJ_G0013745	pseudogene	Chr7:3599278-3599487 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013678	pseudogene	Chr7:3791474-3791683 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014154	pseudogene	Chr7:3428035-3428244 (-)
PWK/PhJ	MGP_PWKPhJ_G0013099	pseudogene	Chr7:3601724-3601933 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012878	pseudogene	Chr7:3004357-3004538 (-)
WSB/EiJ	MGP_WSBEiJ_G0013347	pseudogene	Chr7:3568138-3568347 (-)

Homology

• Gene Tree
  Gm16307
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000090179 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090179	Ensembl Gene Model | MGI Sequence Detail	210	C57BL/6J
transcript	ENSMUST00000161269	Ensembl | MGI Sequence Detail	210	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;