Gm16323 Gene Detail

Summary

• Symbol
  Gm16323
• Name
  predicted gene 16323

• Feature Type
  lncRNA gene
• IDs
  MGI:3826604
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:30303728-30305350 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 21.71 cM

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3826604	lncRNA gene	Chr2:30303728-30305350 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003536	antisense lncRNA gene	Chr2:28640103-28641725 (+)
A/J	MGP_AJ_G0003516	antisense lncRNA gene	Chr2:27500552-27502174 (+)
AKR/J	MGP_AKRJ_G0003495	antisense lncRNA gene	Chr2:28433866-28435488 (+)
BALB/cJ	MGP_BALBcJ_G0003505	antisense lncRNA gene	Chr2:27626501-27628123 (+)
C3H/HeJ	MGP_C3HHeJ_G0003453	antisense lncRNA gene	Chr2:28364709-28366331 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003643	antisense lncRNA gene	Chr2:29579736-29581358 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003153	antisense lncRNA gene	Chr2:26275941-26277595 (+)
CAST/EiJ	MGP_CASTEiJ_G0003416	antisense lncRNA gene	Chr2:28264089-28265711 (+)
CBA/J	MGP_CBAJ_G0003450	antisense lncRNA gene	Chr2:30584904-30586526 (+)
DBA/2J	MGP_DBA2J_G0003458	antisense lncRNA gene	Chr2:27289019-27290641 (+)
FVB/NJ	MGP_FVBNJ_G0003477	antisense lncRNA gene	Chr2:27109018-27110640 (+)
LP/J	MGP_LPJ_G0003531	antisense lncRNA gene	Chr2:28547435-28549057 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003465	antisense lncRNA gene	Chr2:30466637-30468259 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003646	antisense lncRNA gene	Chr2:28348473-28350095 (+)
PWK/PhJ	MGP_PWKPhJ_G0003371	antisense lncRNA gene	Chr2:27129516-27131139 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003316	antisense lncRNA gene	Chr2:28469448-28471066 (+)
WSB/EiJ	MGP_WSBEiJ_G0003451	antisense lncRNA gene	Chr2:28479216-28480838 (+)

Homology

• Gene Tree
  Gm16323
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000087435 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087435	Ensembl Gene Model | MGI Sequence Detail	1623	C57BL/6J
transcript	ENSMUST00000134920	Ensembl | MGI Sequence Detail	556	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;