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Mir1839 Gene Detail
Summary
  • Symbol
    Mir1839
  • Name
    microRNA 1839
  • Synonyms
    mmu-mir-1839
Location &
Maps
more
  • Sequence Map
    Chr7:81179664-81179736 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 45.71 cM
Strain
Comparison
more
  • SNPs within 2kb
    129 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3837345
 miRNA gene Chr7:81179664-81179736 (+)
129S1/SvImJ MGP_129S1SvImJ_G0009041
 miRNA gene Chr7:83595556-83595628 (+)
A/J MGP_AJ_G0009024
 miRNA gene Chr7:81617819-81617891 (+)
AKR/J MGP_AKRJ_G0009013
 miRNA gene Chr7:83421465-83421537 (+)
BALB/cJ MGP_BALBcJ_G0009010
 miRNA gene Chr7:81277778-81277850 (+)
C3H/HeJ MGP_C3HHeJ_G0008948
 miRNA gene Chr7:84038169-84038241 (+)
C57BL/6NJ MGP_C57BL6NJ_G0009249
 miRNA gene Chr7:86857399-86857471 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0008129
 miRNA gene Chr7:84092408-84092480 (+)
CAST/EiJ MGP_CASTEiJ_G0008784
 miRNA gene Chr7:74972365-74972437 (+)
CBA/J MGP_CBAJ_G0008919
 miRNA gene Chr7:89769395-89769467 (+)
DBA/2J MGP_DBA2J_G0008947
 miRNA gene Chr7:80149667-80149739 (+)
FVB/NJ MGP_FVBNJ_G0008967
 miRNA gene Chr7:80089966-80090038 (+)
LP/J MGP_LPJ_G0009044
 miRNA gene Chr7:84827613-84827685 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0008932
 miRNA gene Chr7:89833087-89833159 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0009218
 miRNA gene Chr7:82833056-82833128 (+)
PWK/PhJ MGP_PWKPhJ_G0008713
 miRNA gene Chr7:73364049-73364121 (+)
SPRET/EiJ MGP_SPRETEiJ_G0008554
 miRNA gene Chr7:69842018-69842090 (+)
WSB/EiJ MGP_WSBEiJ_G0008880
 miRNA gene Chr7:83197103-83197175 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Targeted
    1
  • Genomic Mutations
    3 involving Mir1839
  • Find Mice (IMSR)
    1 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100316717 NCBI Gene Model | MGI Sequence Detail 73 C57BL/6J ±  kb
transcript NR_035501 RefSeq | MGI Sequence Detail 73 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0009991
References
more
  • Summaries
    All 17
    Gene Ontology 1
    Phenotypes 12
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:200238 Polikepahad S, et al., Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2. Nucleic Acids Res. 2013 Jan;41(2):1164-77
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory