Gm16331 Pseudogene Detail

Summary

• Symbol
  Gm16331
• Name
  predicted gene 16331

• Feature Type
  pseudogene
• IDs
  MGI:3840145
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:98355945-98356442 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 48.51 cM

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3840145	pseudogene	Chr14:98355945-98356442 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011140	pseudogene	Chr14:94358256-94358753 (+)
A/J	MGP_AJ_G0011133	pseudogene	Chr14:91385186-91385683 (+)
AKR/J	MGP_AKRJ_G0011093	pseudogene	Chr14:94028332-94028825 (+)
BALB/cJ	MGP_BALBcJ_G0011104	pseudogene	Chr14:91654439-91654936 (+)
C3H/HeJ	MGP_C3HHeJ_G0011004	pseudogene	Chr14:93931948-93932445 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011396	pseudogene	Chr14:98183157-98183654 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009981	pseudogene	Chr14:88441439-88441923 (+)
CAST/EiJ	MGP_CASTEiJ_G0010827	pseudogene	Chr14:91215442-91215938 (+)
CBA/J	MGP_CBAJ_G0010981	pseudogene	Chr14:101828103-101828596 (+)
DBA/2J	MGP_DBA2J_G0011027	pseudogene	Chr14:90848070-90848563 (+)
FVB/NJ	MGP_FVBNJ_G0011032	pseudogene	Chr14:89877628-89878125 (+)
LP/J	MGP_LPJ_G0011118	pseudogene	Chr14:95159720-95160217 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0011374	pseudogene	Chr14:93567677-93568174 (+)
PWK/PhJ	MGP_PWKPhJ_G0010696	pseudogene	Chr14:87806668-87807161 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010520	pseudogene	Chr14:89499944-89500415 (+)
WSB/EiJ	MGP_WSBEiJ_G0010872	pseudogene	Chr14:94125149-94125642 (+)

Homology

• Gene Tree
  Gm16331
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm16331
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000086133 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086133	Ensembl Gene Model | MGI Sequence Detail	498	C57BL/6J
transcript	ENSMUST00000144274	Ensembl | MGI Sequence Detail	498	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;