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Vmn1r-ps16 Pseudogene Detail
Summary
  • Symbol
    Vmn1r-ps16
  • Name
    vomeronasal 1 receptor, pseudogene 16
Location &
Maps
more
  • Sequence Map
    Chr6:58085048-58085152 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 27.82 cM
Strain
Comparison
more
  • SNPs within 2kb
    111 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3852364
 pseudogene Chr6:58085004-58085237 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040450
 pseudogene Chr6:57654127-57654231 (-)
A/J MGP_AJ_G0040430
 pseudogene Chr6:55101536-55101640 (-)
AKR/J MGP_AKRJ_G0040357
 pseudogene Chr6:56958093-56958197 (-)
BALB/cJ MGP_BALBcJ_G0040435
 pseudogene Chr6:55418730-55418834 (-)
C3H/HeJ MGP_C3HHeJ_G0040056
 pseudogene Chr6:56939758-56939862 (-)
C57BL/6NJ MGP_C57BL6NJ_G0041049
 pseudogene Chr6:58959407-58959511 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0039122
 pseudogene Chr6:56667662-56667766 (-)
CBA/J MGP_CBAJ_G0040025
 pseudogene Chr6:61394728-61394832 (-)
DBA/2J MGP_DBA2J_G0040228
 pseudogene Chr6:54868090-54868194 (-)
FVB/NJ MGP_FVBNJ_G0040178
 pseudogene Chr6:54451781-54451885 (-)
LP/J MGP_LPJ_G0040269
 pseudogene Chr6:57590565-57590669 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0040169
 pseudogene Chr6:63931408-63931512 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0041132
 pseudogene Chr6:57276204-57276308 (-)
PWK/PhJ MGP_PWKPhJ_G0038803
 pseudogene Chr6:54566552-54566656 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038516
 pseudogene Chr6:56470161-56470262 (+)
WSB/EiJ MGP_WSBEiJ_G0039364
 pseudogene Chr6:56939684-56939788 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107530 Ensembl Gene Model | MGI Sequence Detail 105 C57BL/6J ±  kb
transcript ENSMUST00000204747 Ensembl | MGI Sequence Detail 105 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory