Vmn1r-ps87 Pseudogene Detail

Summary

• Symbol
  Vmn1r-ps87
• Name
  vomeronasal 1 receptor, pseudogene 87

• Feature Type
  pseudogene
• IDs
  MGI:3852452
  NCBI Gene: 100312516
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:27682286-27683238 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 15.97 cM

Strain
Comparison

• SNPs within 2kb
  197 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3852452	pseudogene	Chr7:27682286-27683238 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  100312516

Representative Sequences			Length	Strain/Species
genomic	100312516	NCBI Gene Model | MGI Sequence Detail	953	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18