n-TFgaa3 Gene Detail

Summary

• Symbol
  n-TFgaa3
• Name
  nuclear encoded tRNA pheylalanine 3 (anticodon GAA)
• Synonyms
  trna961-PheGAA, tRNA-Phe-1-2

• Feature Type
  tRNA gene
• IDs
  MGI:4413998
  NCBI Gene: 102467582
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:80084798-80084870 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4413998	tRNA gene	Chr10:80084798-80084870 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  2

• NCBI Gene
  102467582

Representative Sequences			Length	Strain/Species
genomic	102467582	NCBI Gene Model | MGI Sequence Detail	73	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:152375 Chan PP, et al., GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res. 2009 Jan;37(Database issue):D93-7
• Latest
  J:335324 Hughes LA, et al., Copy number variation in tRNA isodecoder genes impairs mammalian development and balanced translation. Nat Commun. 2023 Apr 18;14(1):2210