Gm16536 Gene Detail

Summary

• Symbol
  Gm16536
• Name
  predicted gene 16536

• Feature Type
  lncRNA gene
• IDs
  MGI:4414956
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:45768067-45769655 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 25.24 cM

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4414956	lncRNA gene	Chr9:45768067-45769655 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004623	antisense lncRNA gene	Chr9:44449369-44450948 (-)
A/J	MGP_AJ_G0004604	antisense lncRNA gene	Chr9:43201342-43202930 (-)
AKR/J	MGP_AKRJ_G0004587	antisense lncRNA gene	Chr9:44084972-44086560 (-)
BALB/cJ	MGP_BALBcJ_G0004588	antisense lncRNA gene	Chr9:42924618-42926206 (-)
C3H/HeJ	MGP_C3HHeJ_G0004537	antisense lncRNA gene	Chr9:44542147-44543735 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004738	antisense lncRNA gene	Chr9:45734319-45735907 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004189	antisense lncRNA gene	Chr9:42742535-42744147 (-)
CAST/EiJ	MGP_CASTEiJ_G0004495	antisense lncRNA gene	Chr9:44403996-44405585 (-)
CBA/J	MGP_CBAJ_G0004531	antisense lncRNA gene	Chr9:47407705-47409293 (-)
DBA/2J	MGP_DBA2J_G0004546	antisense lncRNA gene	Chr9:43075343-43076931 (-)
FVB/NJ	MGP_FVBNJ_G0004564	antisense lncRNA gene	Chr9:42343319-42344907 (-)
LP/J	MGP_LPJ_G0004627	antisense lncRNA gene	Chr9:44776564-44778143 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004552	antisense lncRNA gene	Chr9:49183199-49184787 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004737	antisense lncRNA gene	Chr9:43994157-43995745 (-)
PWK/PhJ	MGP_PWKPhJ_G0004448	antisense lncRNA gene	Chr9:42980546-42982125 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004388	antisense lncRNA gene	Chr9:44318845-44320445 (-)
WSB/EiJ	MGP_WSBEiJ_G0004536	antisense lncRNA gene	Chr9:44045795-44047383 (-)

Homology

• Gene Tree
  Gm16536
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000089810 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089810	Ensembl Gene Model | MGI Sequence Detail	1589	C57BL/6J
transcript	ENSMUST00000162209	Ensembl | MGI Sequence Detail	1589	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 6
• Earliest
  J:73796 Mouse Genome Informatics Scientific Curators, Function or Process or Component Unknown following Literature Review. 2002-2023;
• Latest
  J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;