Gm16576 Gene Detail

Summary

• Symbol
  Gm16576
• Name
  predicted gene 16576

• Feature Type
  lncRNA gene
• IDs
  MGI:4414996
  NCBI Gene: 100504191
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:79626899-79641595 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 37.85 cM

Strain
Comparison

• SNPs within 2kb
  471 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4414996	lncRNA gene	Chr15:79626899-79641595 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005609	lincRNA gene	Chr15:80035762-80053456 (+)
A/J	MGP_AJ_G0005596	lincRNA gene	Chr15:77266583-77281216 (+)
AKR/J	MGP_AKRJ_G0005575	lincRNA gene	Chr15:79429254-79443715 (+)
BALB/cJ	MGP_BALBcJ_G0005576	lincRNA gene	Chr15:77280138-77294832 (+)
C3H/HeJ	MGP_C3HHeJ_G0005523	lincRNA gene	Chr15:79416666-79432068 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005734	lincRNA gene	Chr15:83185930-83200595 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005099	lincRNA gene	Chr15:73749408-73765439 (+)
CAST/EiJ	MGP_CASTEiJ_G0005467	lincRNA gene	Chr15:80128075-80145947 (+)
CBA/J	MGP_CBAJ_G0005513	lincRNA gene	Chr15:85778293-85794475 (+)
DBA/2J	MGP_DBA2J_G0005528	lincRNA gene	Chr15:76753478-76768745 (+)
FVB/NJ	MGP_FVBNJ_G0005555	lincRNA gene	Chr15:75782113-75796906 (+)
LP/J	MGP_LPJ_G0005612	lincRNA gene	Chr15:80227615-80242785 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005540	lincRNA gene	Chr15:90875177-90891359 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005734	lincRNA gene	Chr15:79450859-79468130 (+)
PWK/PhJ	MGP_PWKPhJ_G0005416	lincRNA gene	Chr15:76764941-76780473 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005335	lincRNA gene	Chr15:79251232-79268815 (+)
WSB/EiJ	MGP_WSBEiJ_G0005517	lincRNA gene	Chr15:79835298-79852018 (+)

Homology

• Gene Tree
  Gm16576
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  22 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Gene trapped
  2
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm16576
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000087543 (Evidence)
• NCBI Gene
  100504191

Representative Sequences			Length	Strain/Species
genomic	100504191	NCBI Gene Model | MGI Sequence Detail	14697	C57BL/6J
transcript	NR_045069	RefSeq | MGI Sequence Detail	5404	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 28

  Diseases 1

  Phenotypes 22
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27