About   Help   FAQ
Gm16578 Gene Detail
Summary
  • Symbol
    Gm16578
  • Name
    predicted gene 16578
  • Feature Type
    lncRNA gene
  • IDs
    MGI:4414998
    NCBI Gene: 105245508
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:54373472-54377042 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 28.41 cM
Strain
Comparison
more
  • SNPs within 2kb
    240 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4414998
 lncRNA gene Chr13:54373472-54377047 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003188
 antisense lncRNA gene Chr13:53602531-53606101 (-)
A/J MGP_AJ_G0003163
 antisense lncRNA gene Chr13:51649989-51653573 (-)
AKR/J MGP_AKRJ_G0003145
 antisense lncRNA gene Chr13:53160577-53164148 (-)
BALB/cJ MGP_BALBcJ_G0003150
 antisense lncRNA gene Chr13:51866911-51870495 (-)
C3H/HeJ MGP_C3HHeJ_G0003106
 antisense lncRNA gene Chr13:52980486-52984070 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003294
 antisense lncRNA gene Chr13:55254497-55258067 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0003074
 antisense lncRNA gene Chr13:53050519-53054108 (-)
CBA/J MGP_CBAJ_G0003103
 antisense lncRNA gene Chr13:57329788-57333372 (-)
DBA/2J MGP_DBA2J_G0003108
 antisense lncRNA gene Chr13:51216669-51220239 (-)
FVB/NJ MGP_FVBNJ_G0003126
 antisense lncRNA gene Chr13:50666508-50670078 (-)
LP/J MGP_LPJ_G0003184
 antisense lncRNA gene Chr13:53878078-53881648 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003117
 antisense lncRNA gene Chr13:56852683-56856253 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003295
 antisense lncRNA gene Chr13:52753840-52757410 (-)
PWK/PhJ MGP_PWKPhJ_G0003032
 antisense lncRNA gene Chr13:51185262-51188833 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002977
 antisense lncRNA gene Chr13:51652159-51655745 (-)
WSB/EiJ MGP_WSBEiJ_G0003106
 antisense lncRNA gene Chr13:53086344-53089928 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000090016 Ensembl Gene Model | MGI Sequence Detail 3571 C57BL/6J ±  kb
transcript ENSMUST00000160797 Ensembl | MGI Sequence Detail 784 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory