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n-R5s173 Gene Detail
Summary
  • Symbol
    n-R5s173
  • Name
    nuclear encoded rRNA 5S 173
Location &
Maps
more
  • Sequence Map
    Chr5:107549185-107549303 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 52.23 cM
Strain
Comparison
more
  • SNPs within 2kb
    101 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4422038
 rRNA gene Chr5:107549185-107549303 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036692
 rRNA gene Chr5:109431534-109432312 (+)
A/J MGP_AJ_G0036680
 rRNA gene Chr5:105237348-105237466 (+)
AKR/J MGP_AKRJ_G0036630
 rRNA gene Chr5:108639416-108639534 (+)
BALB/cJ MGP_BALBcJ_G0036670
 rRNA gene Chr5:106371745-106371863 (+)
C3H/HeJ MGP_C3HHeJ_G0036361
 rRNA gene Chr5:109083206-109083324 (+)
C57BL/6NJ MGP_C57BL6NJ_G0037184
 rRNA gene Chr5:113927103-113927221 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034267
 rRNA gene Chr5:100312163-100312281 (+)
CAST/EiJ MGP_CASTEiJ_G0035548
 rRNA gene Chr5:108020247-108020365 (+)
CBA/J MGP_CBAJ_G0036334
 rRNA gene Chr5:117750599-117750717 (+)
DBA/2J MGP_DBA2J_G0036509
 rRNA gene Chr5:105373228-105373346 (+)
FVB/NJ MGP_FVBNJ_G0036465
 rRNA gene Chr5:104106277-104106395 (+)
LP/J MGP_LPJ_G0036556
 rRNA gene Chr5:110019812-110019930 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036463
 rRNA gene Chr5:122674657-122674775 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0037298
 rRNA gene Chr5:108198333-108198451 (+)
PWK/PhJ MGP_PWKPhJ_G0035247
 rRNA gene Chr5:104176047-104176165 (+)
SPRET/EiJ MGP_SPRETEiJ_G0035063
 rRNA gene Chr5:105713575-105713693 (+)
WSB/EiJ MGP_WSBEiJ_G0035751
 rRNA gene Chr5:108494717-108494835 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic 115490219 NCBI Gene Model | MGI Sequence Detail 119 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:156847 Gardner PP, et al., Rfam: updates to the RNA families database. Nucleic Acids Res. 2009 Jan;37(Database issue):D136-40
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory