D930048G16Rik Gene Detail

Summary

• Symbol
  D930048G16Rik
• Name
  RIKEN cDNA D930048G16 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:4437732
  NCBI Gene: 433082
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:24009678-24013215 bp, + strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 12.06 cM

Strain
Comparison

• SNPs within 2kb
  180 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4437732	lncRNA gene	Chr17:24009678-24013215 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• cDNA Data
  3

• Other Mouse Links
  Allen Institute
  GEO

Sequences &
Gene Models

• All Sequences
  2

• NCBI Gene
  433082

Representative Sequences			Length	Strain/Species
transcript	AK086736	GenBank | ENA | DDBJ | MGI Sequence Detail	2097	C57BL/6J

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 5
• Earliest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for D930048G16Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr142954	Chr17:24009599-24009644 (+)	-56 bp