About   Help   FAQ
F630040K05Rik Gene Detail
Summary
  • Symbol
    F630040K05Rik
  • Name
    RIKEN cDNA F630040K05 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:4437734
    NCBI Gene: 433111
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:46045432-46092178 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 22.60 cM
Strain
Comparison
more
  • SNPs within 2kb
    1357 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4437734
 lncRNA gene Chr17:46045432-46099520 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005736
 lincRNA gene Chr17:46769002-46826460 (+)
A/J MGP_AJ_G0005724
 lincRNA gene Chr17:45641210-45694491 (+)
AKR/J MGP_AKRJ_G0005703
 lincRNA gene Chr17:45965749-46020307 (+)
BALB/cJ MGP_BALBcJ_G0005704
 lincRNA gene Chr17:45528854-45584466 (+)
C3H/HeJ MGP_C3HHeJ_G0005652
 lincRNA gene Chr17:46677362-46741757 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005864
 lincRNA gene Chr17:48795201-48855256 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005215
 lincRNA gene Chr17:42453570-42485606 (+)
CAST/EiJ MGP_CASTEiJ_G0005594
 lincRNA gene Chr17:46775908-46842612 (+)
CBA/J MGP_CBAJ_G0005640
 lincRNA gene Chr17:50512724-50579035 (+)
DBA/2J MGP_DBA2J_G0005658
 lincRNA gene Chr17:44430037-44484901 (+)
FVB/NJ MGP_FVBNJ_G0005684
 lincRNA gene Chr17:44032575-44071145 (+)
LP/J MGP_LPJ_G0005739
 lincRNA gene Chr17:47414101-47475143 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005669
 lincRNA gene Chr17:50071457-50133328 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005864
 lincRNA gene Chr17:46322313-46383209 (+)
PWK/PhJ MGP_PWKPhJ_G0005538
 lincRNA gene Chr17:43767550-43787471 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005457
 lincRNA gene Chr17:43212121-43245392 (+)
WSB/EiJ MGP_WSBEiJ_G0005646
 lincRNA gene Chr17:46854035-46915952 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 433111 NCBI Gene Model | MGI Sequence Detail 46747 C57BL/6J ±  kb
transcript NR_152153 RefSeq | MGI Sequence Detail 2634 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory