Vmn1r-ps95 Pseudogene Detail

Summary

• Symbol
  Vmn1r-ps95
• Name
  vomeronasal 1 receptor, pseudogene 95
• Synonyms
  Gm11288

• Feature Type
  pseudogene
• IDs
  MGI:4439042
  NCBI Gene: 100312525
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:22307465-22308363 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 8.20 cM

Strain
Comparison

• SNPs within 2kb
  73 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439042	pseudogene	Chr13:22307459-22308363 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040050	pseudogene	Chr13:20184905-20185809 (-)
AKR/J	MGP_AKRJ_G0039971	pseudogene	Chr13:20425276-20426289 (-)
BALB/cJ	MGP_BALBcJ_G0040026	pseudogene	Chr13:20151417-20152321 (-)
C3H/HeJ	MGP_C3HHeJ_G0039675	pseudogene	Chr13:20465864-20466768 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038779	pseudogene	Chr13:20195109-20196013 (-)
CBA/J	MGP_CBAJ_G0039642	pseudogene	Chr13:22072352-22073256 (-)
DBA/2J	MGP_DBA2J_G0039836	pseudogene	Chr13:19785422-19786326 (-)
FVB/NJ	MGP_FVBNJ_G0039808	pseudogene	Chr13:19384440-19385344 (-)
LP/J	MGP_LPJ_G0039881	pseudogene	Chr13:20855797-20857975 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039792	pseudogene	Chr13:22452899-22453803 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0038443	pseudogene	Chr13:18659379-18660845 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038180	pseudogene	Chr13:19117962-19118863 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Vmn1r-ps95
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Vmn1r-ps95
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000081469 (Evidence)
• NCBI Gene
  100312525

Representative Sequences			Length	Strain/Species
genomic	100312525	NCBI Gene Model | MGI Sequence Detail	899	C57BL/6J

Other
Accession IDs

MGI:3651658

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18