Vmn1r-ps120 Pseudogene Detail

Summary

• Symbol
  Vmn1r-ps120
• Name
  vomeronasal 1 receptor, pseudogene 120
• Synonyms
  Gm11317

• Feature Type
  pseudogene
• IDs
  MGI:4439068
  NCBI Gene: 100312549
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:23124030-23124349 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 9.36 cM

Strain
Comparison

• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439068	pseudogene	Chr13:23123369-23124349 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040041	pseudogene	Chr13:19918101-19918975 (-)
AKR/J	MGP_AKRJ_G0039962	pseudogene	Chr13:20136094-20136968 (-)
BALB/cJ	MGP_BALBcJ_G0040017	pseudogene	Chr13:19880229-19881103 (-)
C3H/HeJ	MGP_C3HHeJ_G0039667	pseudogene	Chr13:20181072-20181946 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040603	pseudogene	Chr13:20981589-20982462 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038770	pseudogene	Chr13:19929302-19930176 (-)
CBA/J	MGP_CBAJ_G0039633	pseudogene	Chr13:21778813-21779687 (-)
DBA/2J	MGP_DBA2J_G0039830	pseudogene	Chr13:19519425-19520299 (+)
FVB/NJ	MGP_FVBNJ_G0039799	pseudogene	Chr13:19073254-19074128 (-)
LP/J	MGP_LPJ_G0039872	pseudogene	Chr13:20563863-20564737 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0040696	pseudogene	Chr13:19948011-19948885 (-)
PWK/PhJ	MGP_PWKPhJ_G0038459	pseudogene	Chr13:19542321-19543201 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038170	pseudogene	Chr13:18854239-18855121 (-)
WSB/EiJ	MGP_WSBEiJ_G0038997	pseudogene	Chr13:20074457-20075331 (-)

Homology

• Gene Tree
  Vmn1r-ps120
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Vmn1r-ps120
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000082268 (Evidence)
• NCBI Gene
  100312549

Representative Sequences			Length	Strain/Species
genomic	100312549	NCBI Gene Model | MGI Sequence Detail	320	C57BL/6J

Other
Accession IDs

MGI:3650391

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18