Vmn1r-ps126 Pseudogene Detail

Summary

• Symbol
  Vmn1r-ps126
• Name
  vomeronasal 1 receptor, pseudogene 126
• Synonyms
  Gm11327

• Feature Type
  pseudogene
• IDs
  MGI:4439077
  NCBI Gene: 100312555
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:23240880-23241787 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 9.51 cM

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439077	pseudogene	Chr13:23240853-23241787 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040041	pseudogene	Chr13:20444319-20445244 (+)
A/J	MGP_AJ_G0040047	pseudogene	Chr13:20021694-20022619 (+)
AKR/J	MGP_AKRJ_G0039968	pseudogene	Chr13:20252869-20253794 (+)
BALB/cJ	MGP_BALBcJ_G0040023	pseudogene	Chr13:20008060-20008985 (+)
C3H/HeJ	MGP_C3HHeJ_G0039672	pseudogene	Chr13:20315316-20317185 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040609	pseudogene	Chr13:21154686-21155611 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038776	pseudogene	Chr13:20053030-20053955 (+)
CBA/J	MGP_CBAJ_G0039639	pseudogene	Chr13:21907954-21908879 (+)
DBA/2J	MGP_DBA2J_G0039833	pseudogene	Chr13:19606651-19607576 (+)
FVB/NJ	MGP_FVBNJ_G0039805	pseudogene	Chr13:19245895-19246820 (+)
LP/J	MGP_LPJ_G0039878	pseudogene	Chr13:20695232-20696158 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039789	pseudogene	Chr13:22268128-22269054 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040702	pseudogene	Chr13:20142738-20143664 (+)
PWK/PhJ	MGP_PWKPhJ_G0038465	pseudogene	Chr13:19669606-19670769 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038176	pseudogene	Chr13:18968929-18973047 (+)
WSB/EiJ	MGP_WSBEiJ_G0039003	pseudogene	Chr13:20278754-20279679 (+)

Homology

• Gene Tree
  Vmn1r-ps126
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Vmn1r-ps126
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000083124 (Evidence)
• NCBI Gene
  100312555

Representative Sequences			Length	Strain/Species
genomic	100312555	NCBI Gene Model | MGI Sequence Detail	908	C57BL/6J

Other
Accession IDs

MGI:3650790

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;20(1):10-18