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Trbj1-5 Gene Detail
Summary
  • Symbol
    Trbj1-5
  • Name
    T cell receptor beta joining 1-5
  • Synonyms
    Gm16642
  • Feature Type
    gene segment
  • IDs
    MGI:4439566
    NCBI Gene: 100125252
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:41512018-41512067 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 19.69 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    165 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439566
 gene segment Chr6:41512018-41512067 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002490
 gene segment Chr6:40042545-40042594 (+)
A/J MGP_AJ_G0002464
 gene segment Chr6:38296633-38296682 (+)
AKR/J MGP_AKRJ_G0002450
 gene segment Chr6:39534902-39534951 (+)
BALB/cJ MGP_BALBcJ_G0002464
 gene segment Chr6:38515516-38515565 (+)
C3H/HeJ MGP_C3HHeJ_G0002437
 gene segment Chr6:39565820-39565869 (+)
C57BL/6NJ MGP_C57BL6NJ_G0002585
 gene segment Chr6:41056792-41056841 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002183
 gene segment Chr6:36076195-36076244 (+)
CAST/EiJ MGP_CASTEiJ_G0002399
 gene segment Chr6:39369052-39369101 (+)
CBA/J MGP_CBAJ_G0002428
 gene segment Chr6:42759539-42759588 (+)
DBA/2J MGP_DBA2J_G0002439
 gene segment Chr6:38140408-38140457 (+)
FVB/NJ MGP_FVBNJ_G0002447
 gene segment Chr6:37853684-37853733 (+)
LP/J MGP_LPJ_G0002487
 gene segment Chr6:40051605-40051654 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002417
 gene segment Chr6:44994602-44994651 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002580
 gene segment Chr6:39511847-39511896 (+)
PWK/PhJ MGP_PWKPhJ_G0002360
 gene segment Chr6:37747180-37747229 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002312
 gene segment Chr6:39127950-39127999 (+)
WSB/EiJ MGP_WSBEiJ_G0002426
 gene segment Chr6:39422950-39422999 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100125252 NCBI Gene Model | MGI Sequence Detail 50 C57BL/6J ±  kb
polypeptide A0A0A6YX16 UniProt | EBI | MGI Sequence Detail 17 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
References
more
  • Summaries
    All 6
  • Earliest
    J:7518 Gascoigne NR, et al., Genomic organization and sequence of T-cell receptor beta-chain constant- and joining-region genes. Nature. 1984 Aug 2-8;310(5976):387-91
  • Latest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory