Gm16751 Gene Detail

Summary

• Symbol
  Gm16751
• Name
  predicted gene, 16751

• Feature Type
  lncRNA gene
• IDs
  MGI:4439675
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:160682756-160729948 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 80.98 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1026 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439675	lncRNA gene	Chr2:160682756-160729948 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003684	antisense lncRNA gene	Chr2:166040869-166088754 (-)
A/J	MGP_AJ_G0003666	antisense lncRNA gene	Chr2:159363783-159415664 (-)
AKR/J	MGP_AKRJ_G0003644	antisense lncRNA gene	Chr2:164079716-164126827 (-)
BALB/cJ	MGP_BALBcJ_G0003655	antisense lncRNA gene	Chr2:159677500-159728024 (-)
C3H/HeJ	MGP_C3HHeJ_G0003602	antisense lncRNA gene	Chr2:164408903-164461712 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003794	antisense lncRNA gene	Chr2:170954369-171003601 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003300	antisense lncRNA gene	Chr2:152742816-152791471 (-)
CAST/EiJ	MGP_CASTEiJ_G0003565	antisense lncRNA gene	Chr2:164793150-164845116 (-)
CBA/J	MGP_CBAJ_G0003599	antisense lncRNA gene	Chr2:177095761-177166484 (-)
DBA/2J	MGP_DBA2J_G0003606	antisense lncRNA gene	Chr2:158547071-158595180 (-)
FVB/NJ	MGP_FVBNJ_G0003627	antisense lncRNA gene	Chr2:156948322-156996123 (-)
LP/J	MGP_LPJ_G0003684	antisense lncRNA gene	Chr2:166147213-166196325 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003615	antisense lncRNA gene	Chr2:180812973-180862260 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003794	antisense lncRNA gene	Chr2:163915023-163965966 (-)
PWK/PhJ	MGP_PWKPhJ_G0003520	antisense lncRNA gene	Chr2:158096606-158142247 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003463	antisense lncRNA gene	Chr2:162798685-162845707 (-)
WSB/EiJ	MGP_WSBEiJ_G0003599	antisense lncRNA gene	Chr2:164812231-164861068 (-)

Homology

• Gene Tree
  Gm16751
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085303 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085303	Ensembl Gene Model | MGI Sequence Detail	47193	C57BL/6J
transcript	ENSMUST00000142212	Ensembl | MGI Sequence Detail	1685	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm16751:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr27257	Chr2:160729955-160729963 (-)	-11 bp