Gm16897 Gene Detail

Summary

• Symbol
  Gm16897
• Name
  predicted gene, 16897

• Feature Type
  lncRNA gene
• IDs
  MGI:4439821
  NCBI Gene: 320400
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:194638067-194659267 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 98.38 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  301 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439821	lncRNA gene	Chr1:194638067-194659268 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002835	antisense lncRNA gene	Chr1:202127775-202158229 (-)
A/J	MGP_AJ_G0002812	antisense lncRNA gene	Chr1:193832479-193854679 (-)
AKR/J	MGP_AKRJ_G0002793	antisense lncRNA gene	Chr1:199563908-199588469 (-)
BALB/cJ	MGP_BALBcJ_G0002799	antisense lncRNA gene	Chr1:194528585-194558455 (-)
C3H/HeJ	MGP_C3HHeJ_G0002757	antisense lncRNA gene	Chr1:200458291-200479177 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002941	antisense lncRNA gene	Chr1:208503109-208523114 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002487	antisense lncRNA gene	Chr1:185237149-185254873 (-)
CAST/EiJ	MGP_CASTEiJ_G0002729	antisense lncRNA gene	Chr1:200024018-200044314 (-)
CBA/J	MGP_CBAJ_G0002752	antisense lncRNA gene	Chr1:216191431-216215248 (-)
DBA/2J	MGP_DBA2J_G0002759	antisense lncRNA gene	Chr1:192547736-192583497 (-)
FVB/NJ	MGP_FVBNJ_G0002779	antisense lncRNA gene	Chr1:190641252-190662384 (-)
LP/J	MGP_LPJ_G0002835	antisense lncRNA gene	Chr1:203281106-203301242 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002769	antisense lncRNA gene	Chr1:222843916-222867831 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002946	antisense lncRNA gene	Chr1:199420722-199444527 (-)
PWK/PhJ	MGP_PWKPhJ_G0002687	antisense lncRNA gene	Chr1:191864782-191885391 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002637	antisense lncRNA gene	Chr1:198465227-198486201 (-)
WSB/EiJ	MGP_WSBEiJ_G0002758	antisense lncRNA gene	Chr1:199696829-199719659 (-)

Homology

• Gene Tree
  Gm16897
  

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000097325 (Evidence)
• NCBI Gene
  320400

Representative Sequences			Length	Strain/Species
genomic	320400	NCBI Gene Model | MGI Sequence Detail	21201	C57BL/6J
transcript	NR_033564	RefSeq | MGI Sequence Detail	2491	C57BL/6

Molecular
Reagents

• All nucleic 3

  Genomic 1

  cDNA 2

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;