Gm16958 Gene Detail

Summary

• Symbol
  Gm16958
• Name
  predicted gene, 16958

• Feature Type
  lncRNA gene
• IDs
  MGI:4439882
  NCBI Gene: 100862268
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:126954953-126961937 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 56.07 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  271 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439882	lncRNA gene	Chr3:126954953-126961939 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003832	antisense lncRNA gene	Chr3:129608802-129616848 (+)
A/J	MGP_AJ_G0003812	antisense lncRNA gene	Chr3:125192982-125199815 (+)
AKR/J	MGP_AKRJ_G0003789	antisense lncRNA gene	Chr3:128419698-128428634 (+)
BALB/cJ	MGP_BALBcJ_G0003799	antisense lncRNA gene	Chr3:125052101-125058930 (+)
C3H/HeJ	MGP_C3HHeJ_G0003746	antisense lncRNA gene	Chr3:128806977-128813781 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003942	antisense lncRNA gene	Chr3:134295141-134303697 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003445	antisense lncRNA gene	Chr3:120442546-120449390 (+)
CAST/EiJ	MGP_CASTEiJ_G0003711	antisense lncRNA gene	Chr3:128320198-128328531 (+)
CBA/J	MGP_CBAJ_G0003740	antisense lncRNA gene	Chr3:138808813-138815640 (+)
DBA/2J	MGP_DBA2J_G0003753	antisense lncRNA gene	Chr3:124407078-124414774 (+)
FVB/NJ	MGP_FVBNJ_G0003774	antisense lncRNA gene	Chr3:121979162-121986030 (+)
LP/J	MGP_LPJ_G0003834	antisense lncRNA gene	Chr3:131159017-131166133 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003761	antisense lncRNA gene	Chr3:146786229-146793084 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003943	antisense lncRNA gene	Chr3:128060424-128068396 (+)
PWK/PhJ	MGP_PWKPhJ_G0003666	antisense lncRNA gene	Chr3:124129562-124136677 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003611	antisense lncRNA gene	Chr3:126134374-126141238 (+)
WSB/EiJ	MGP_WSBEiJ_G0003747	antisense lncRNA gene	Chr3:128778912-128785765 (+)

Homology

• Gene Tree
  Gm16958
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm16958
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  2

• Ensembl
  ENSMUSG00000097456 (Evidence)
• NCBI Gene
  100862268

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097456	Ensembl Gene Model | MGI Sequence Detail	6985	C57BL/6J
transcript	ENSMUST00000180603	Ensembl | MGI Sequence Detail	1765	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14