Mir3472 Gene Detail

Summary

• Symbol
  Mir3472
• Name
  microRNA 3472
• Synonyms
  mmu-mir-3472

• Feature Type
  miRNA gene
• IDs
  MGI:4441439
  NCBI Gene: 100499526
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:143822340-143822410 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 66.25 cM

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4441439	miRNA gene	ChrX:143822340-143822410 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Mir3472
  

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  1

• Ensembl
  ENSMUSG00000118971 (Evidence)
• NCBI Gene
  100499526

Representative Sequences			Length	Strain/Species
genomic	100499526	NCBI Gene Model | MGI Sequence Detail	71	C57BL/6J
transcript	NR_037309	RefSeq | MGI Sequence Detail	71	ZRU/MplStud

Other Database
Links

miRBase

MI0014704

References

• Summaries
  All 4
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4