Mir3078 Gene Detail

Summary

• Symbol
  Mir3078
• Name
  microRNA 3078
• Synonyms
  mmu-mir-3078

• Feature Type
  miRNA gene
• IDs
  MGI:4834251
  NCBI Gene: 100526520
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:64828634-64828720 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 33.77 cM

Strain
Comparison

• SNPs within 2kb
  46 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4834251	miRNA gene	Chr14:64828634-64828720 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008133	miRNA gene	Chr14:59153681-59153767 (+)
A/J	MGP_AJ_G0008120	miRNA gene	Chr14:57802067-57802153 (+)
AKR/J	MGP_AKRJ_G0008098	miRNA gene	Chr14:59828621-59828707 (+)
BALB/cJ	MGP_BALBcJ_G0008102	miRNA gene	Chr14:57750319-57750405 (+)
C3H/HeJ	MGP_C3HHeJ_G0008046	miRNA gene	Chr14:59463087-59463173 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008292	miRNA gene	Chr14:61909587-61909673 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007383	miRNA gene	Chr14:55741062-55741149 (+)
CAST/EiJ	MGP_CASTEiJ_G0007924	miRNA gene	Chr14:55944173-55944259 (+)
CBA/J	MGP_CBAJ_G0008014	miRNA gene	Chr14:63782879-63782965 (+)
DBA/2J	MGP_DBA2J_G0008050	miRNA gene	Chr14:57466569-57466655 (+)
FVB/NJ	MGP_FVBNJ_G0008073	miRNA gene	Chr14:56862420-56862506 (+)
LP/J	MGP_LPJ_G0008133	miRNA gene	Chr14:60188611-60188697 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008042	miRNA gene	Chr14:62944038-62944124 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008288	miRNA gene	Chr14:58993751-58993837 (+)
PWK/PhJ	MGP_PWKPhJ_G0007845	miRNA gene	Chr14:54152245-54152331 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007741	miRNA gene	Chr14:54954655-54954741 (+)
WSB/EiJ	MGP_WSBEiJ_G0008001	miRNA gene	Chr14:59307703-59307789 (+)

Homology

• Gene Tree
  Mir3078
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir3078
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000092972 (Evidence)
• NCBI Gene
  100526520

Representative Sequences			Length	Strain/Species
genomic	100526520	NCBI Gene Model | MGI Sequence Detail	87	C57BL/6J
transcript	NR_037239	RefSeq | MGI Sequence Detail	87	ZRU/MplStud

Other Database
Links

miRBase

MI0014041

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4