Mir669d-2 Gene Detail

Summary

• Symbol
  Mir669d-2
• Name
  microRNA 669d-2
• Synonyms
  mmu-mir-669d-2

• Feature Type
  miRNA gene
• IDs
  MGI:4834278
  NCBI Gene: 100526550
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:10476455-10476540 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 8.22 cM

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4834278	miRNA gene	Chr2:10476455-10476540 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008476	miRNA gene	Chr2:7831009-7831094 (+)
A/J	MGP_AJ_G0008463	miRNA gene	Chr2:7494692-7494772 (+)
AKR/J	MGP_AKRJ_G0008448	miRNA gene	Chr2:7736811-7736891 (+)
BALB/cJ	MGP_BALBcJ_G0008451	miRNA gene	Chr2:7494774-7494854 (+)
C3H/HeJ	MGP_C3HHeJ_G0008393	miRNA gene	Chr2:7694623-7694703 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008653	miRNA gene	Chr2:8042267-8042352 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007670	miRNA gene	Chr2:7005250-7005335 (+)
CAST/EiJ	MGP_CASTEiJ_G0008250	miRNA gene	Chr2:7726680-7726765 (+)
CBA/J	MGP_CBAJ_G0008359	miRNA gene	Chr2:8374722-8374802 (+)
DBA/2J	MGP_DBA2J_G0008394	miRNA gene	Chr2:7423867-7423947 (+)
FVB/NJ	MGP_FVBNJ_G0008415	miRNA gene	Chr2:7371171-7371251 (+)
LP/J	MGP_LPJ_G0008479	miRNA gene	Chr2:7730182-7730267 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008378	miRNA gene	Chr2:8310617-8310697 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008643	miRNA gene	Chr2:7690612-7690697 (+)
PWK/PhJ	MGP_PWKPhJ_G0008174	miRNA gene	Chr2:7418179-7418264 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0008047	miRNA gene	Chr2:7693568-7693653 (+)
WSB/EiJ	MGP_WSBEiJ_G0008334	miRNA gene	Chr2:7781521-7781606 (+)

Homology

• Gene Tree
  Mir669d-2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Mir669d-2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000080504 (Evidence)
• NCBI Gene
  100526550

Representative Sequences			Length	Strain/Species
genomic	100526550	NCBI Gene Model | MGI Sequence Detail	86	C57BL/6J
transcript	NR_130334	RefSeq | MGI Sequence Detail	86	ZRU/MplStud

Other Database
Links

miRBase

MI0014051

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
• Latest
  J:338340 Wickramage I, et al., SINE RNA of the imprinted miRNA clusters mediates constitutive type III interferon expression and antiviral protection in hemochorial placentas. Cell Host Microbe. 2023 Jul 12;31(7):1185-1199.e10