Mir3104 Gene Detail

Summary

• Symbol
  Mir3104
• Name
  microRNA 3104
• Synonyms
  mmu-mir-3104

• Feature Type
  miRNA gene
• IDs
  MGI:4834323
  NCBI Gene: 100526509
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:141545916-141545978 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 87.48 cM

Strain
Comparison

• SNPs within 2kb
  50 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4834323	miRNA gene	Chr7:141545916-141545978 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0009072	miRNA gene	Chr7:147197025-147197087 (+)
A/J	MGP_AJ_G0009055	miRNA gene	Chr7:142973150-142973212 (+)
AKR/J	MGP_AKRJ_G0009045	miRNA gene	Chr7:146962720-146962782 (+)
BALB/cJ	MGP_BALBcJ_G0009041	miRNA gene	Chr7:142706566-142706628 (+)
C3H/HeJ	MGP_C3HHeJ_G0008979	miRNA gene	Chr7:146685960-146686022 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0009280	miRNA gene	Chr7:152559111-152559173 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0008158	miRNA gene	Chr7:144162694-144162756 (+)
CAST/EiJ	MGP_CASTEiJ_G0008814	miRNA gene	Chr7:139010110-139010172 (+)
CBA/J	MGP_CBAJ_G0008950	miRNA gene	Chr7:157722818-157722880 (+)
DBA/2J	MGP_DBA2J_G0008979	miRNA gene	Chr7:140909543-140909605 (+)
FVB/NJ	MGP_FVBNJ_G0008998	miRNA gene	Chr7:140828599-140828661 (+)
LP/J	MGP_LPJ_G0009074	miRNA gene	Chr7:148687714-148687776 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008963	miRNA gene	Chr7:158354259-158354321 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0009249	miRNA gene	Chr7:145904598-145904660 (+)
PWK/PhJ	MGP_PWKPhJ_G0008744	miRNA gene	Chr7:134203174-134203236 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0008585	miRNA gene	Chr7:132721482-132721544 (+)
WSB/EiJ	MGP_WSBEiJ_G0008910	miRNA gene	Chr7:146876892-146876954 (+)

Homology

• Gene Tree
  Mir3104
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Mir3104
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000092652 (Evidence)
• NCBI Gene
  100526509

Representative Sequences			Length	Strain/Species
genomic	100526509	NCBI Gene Model | MGI Sequence Detail	63	C57BL/6J
transcript	NR_037291	RefSeq | MGI Sequence Detail	63	ZRU/MplStud

Other Database
Links

miRBase

MI0014101

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
• Latest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4