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Mir3109 Gene Detail
Summary
  • Symbol
    Mir3109
  • Name
    microRNA 3109
  • Synonyms
    mmu-mir-3109
Location &
Maps
more
  • Sequence Map
    Chr9:69364226-69364313 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 38.58 cM
Strain
Comparison
more
  • SNPs within 2kb
    108 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4834328
 miRNA gene Chr9:69364226-69364313 (+)
129S1/SvImJ MGP_129S1SvImJ_G0009217
 miRNA gene Chr9:69450831-69450918 (+)
A/J MGP_AJ_G0009198
 miRNA gene Chr9:67064057-67064144 (+)
AKR/J MGP_AKRJ_G0009187
 miRNA gene Chr9:68654376-68654463 (+)
BALB/cJ MGP_BALBcJ_G0009183
 miRNA gene Chr9:66791648-66791735 (+)
C3H/HeJ MGP_C3HHeJ_G0009123
 miRNA gene Chr9:69160739-69160826 (+)
C57BL/6NJ MGP_C57BL6NJ_G0009424
 miRNA gene Chr9:71310017-71310104 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0008954
 miRNA gene Chr9:69411729-69411816 (+)
CBA/J MGP_CBAJ_G0009090
 miRNA gene Chr9:73811417-73811504 (+)
DBA/2J MGP_DBA2J_G0009120
 miRNA gene Chr9:66819051-66819138 (+)
FVB/NJ MGP_FVBNJ_G0009137
 miRNA gene Chr9:66134459-66134546 (+)
LP/J MGP_LPJ_G0009215
 miRNA gene Chr9:69714153-69714240 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0009104
 miRNA gene Chr9:74924208-74924295 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0009394
 miRNA gene Chr9:68791572-68791659 (+)
PWK/PhJ MGP_PWKPhJ_G0008880
 miRNA gene Chr9:67033310-67033397 (+)
SPRET/EiJ MGP_SPRETEiJ_G0008720
 miRNA gene Chr9:69099934-69100021 (+)
WSB/EiJ MGP_WSBEiJ_G0009050
 miRNA gene Chr9:68684399-68684486 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100526560 NCBI Gene Model | MGI Sequence Detail 88 C57BL/6J ±  kb
transcript NR_037296 RefSeq | MGI Sequence Detail 88 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0014106
References
more
  • Summaries
    All 6
    Phenotypes 2
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory