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Traj2 Gene Detail
Summary
  • Symbol
    Traj2
  • Name
    T cell receptor alpha joining 2
  • Feature Type
    gene segment
  • IDs
    MGI:4840255
    NCBI Gene: 654838
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr14:54455293-54455358 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.70 cM
Strain
Comparison
more
  • SNPs within 2kb
    60 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4840255
 gene segment Chr14:54455293-54455358 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002485
 gene segment Chr14:48146152-48146217 (+)
A/J MGP_AJ_G0002459
 gene segment Chr14:47238107-47238172 (+)
AKR/J MGP_AKRJ_G0002445
 gene segment Chr14:48947091-48947156 (+)
BALB/cJ MGP_BALBcJ_G0002453
 gene segment Chr14:47206881-47206946 (+)
C3H/HeJ MGP_C3HHeJ_G0002432
 gene segment Chr14:48628084-48628149 (+)
C57BL/6NJ MGP_C57BL6NJ_G0002580
 gene segment Chr14:50614117-50614182 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002178
 gene segment Chr14:45650753-45650818 (+)
CAST/EiJ MGP_CASTEiJ_G0002394
 gene segment Chr14:44860063-44860128 (+)
CBA/J MGP_CBAJ_G0002423
 gene segment Chr14:52105786-52105851 (+)
DBA/2J MGP_DBA2J_G0002428
 gene segment Chr14:46982338-46982403 (+)
FVB/NJ MGP_FVBNJ_G0002442
 gene segment Chr14:46436573-46436638 (+)
LP/J MGP_LPJ_G0002482
 gene segment Chr14:49177372-49177437 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002412
 gene segment Chr14:51547260-51547325 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002575
 gene segment Chr14:48128856-48128921 (+)
PWK/PhJ MGP_PWKPhJ_G0002355
 gene segment Chr14:43505987-43506052 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002307
 gene segment Chr14:44107244-44107309 (+)
WSB/EiJ MGP_WSBEiJ_G0002421
 gene segment Chr14:48420610-48420675 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype reference
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 654838 NCBI Gene Model | MGI Sequence Detail 66 C57BL/6J ±  kb
polypeptide A0A0G2JDE4 UniProt | EBI | MGI Sequence Detail 22 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 6
    Genomic 6
References
more
  • Summaries
    All 9
    Phenotypes 1
  • Earliest
    J:28590 Hue I, et al., A novel type of aberrant T cell receptor alpha-chain gene rearrangement. Implications for allelic exclusion and the V-J recombination process. J Immunol. 1990 Jun 1;144(11):4410-9
  • Latest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory