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9130221F21Rik Gene Detail
Summary
  • Symbol
    9130221F21Rik
  • Name
    RIKEN cDNA 9130221F21 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:4840488
    NCBI Gene: 330350
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:71990880-72019512 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    887 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4840488
 lncRNA gene Chr6:71990880-72019512 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006988
 lincRNA gene Chr6:72526030-72552798 (-)
A/J MGP_AJ_G0006984
 lincRNA gene Chr6:69737230-69759192 (-)
AKR/J MGP_AKRJ_G0006952
 lincRNA gene Chr6:71755552-71791413 (-)
BALB/cJ MGP_BALBcJ_G0006960
 lincRNA gene Chr6:69758976-69784913 (-)
C3H/HeJ MGP_C3HHeJ_G0006965
 lincRNA gene Chr6:112461427-112489377 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007123
 lincRNA gene Chr6:74429869-74463328 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0006885
 lincRNA gene Chr6:77423685-77455679 (-)
DBA/2J MGP_DBA2J_G0006905
 lincRNA gene Chr6:69120229-69143601 (-)
FVB/NJ MGP_FVBNJ_G0006929
 lincRNA gene Chr6:68496330-68524601 (-)
LP/J MGP_LPJ_G0006989
 lincRNA gene Chr6:72445281-72474601 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006909
 lincRNA gene Chr6:80866340-80905724 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007128
 lincRNA gene Chr6:71581139-71611859 (-)
PWK/PhJ MGP_PWKPhJ_G0006757
 lincRNA gene Chr6:68014943-68049938 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006667
 lincRNA gene Chr6:70303860-70340888 (-)
WSB/EiJ MGP_WSBEiJ_G0006874
 lincRNA gene Chr6:71934778-71966613 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 330350 NCBI Gene Model | MGI Sequence Detail 28633 C57BL/6J ±  kb
transcript NR_046180 RefSeq | MGI Sequence Detail 2631 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    cDNA 1
References
more
  • Summaries
    All 10
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory