Gm17019 Gene Detail

Summary

• Symbol
  Gm17019
• Name
  predicted gene 17019

• Feature Type
  protein coding gene
• IDs
  MGI:4868370
  NCBI Gene: 66773
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:15078964-15083012 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 6.49 cM

Strain
Comparison

• SNPs within 2kb
  35 from dbSNP Build 142
• Strain Annotations
  6

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4868370	protein coding gene	Chr5:15078964-15083030 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0017202	protein coding gene	Chr10:43042477-43069873 (+)
A/J	MGP_AJ_G0029264	protein coding gene	Chr5:14299630-14308713 (+)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0016962	protein coding gene	Chr10:42808784-42820312 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0029031	protein coding gene	Chr5:27444771-27447145 (-)
DBA/2J	MGP_DBA2J_G0030488	protein coding gene	Chr6:39557086-39566669 (-)
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• MGI Vertebrate Homology
  Gm17019 stringent orthology
  1 mouse;4 rat
  
• Gene Tree
  Gm17019
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  8
• UniProt
  1
• CCDS
  CCDS51419.1

• Ensembl
  ENSMUSG00000091897 (Evidence)
• NCBI Gene
  66773

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091897	Ensembl Gene Model | MGI Sequence Detail	4049	C57BL/6J
transcript	ENSMUST00000167908	Ensembl | MGI Sequence Detail	1162	Not Applicable
polypeptide	ENSMUSP00000127520	Ensembl | MGI Sequence Detail	255	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR006907 Disks large homolog 5, N-terminal

References

• Summaries
  All 5
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:155721 Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI), Consensus CDS project. Database Download. 2010;