Gm17322 Gene Detail

Summary

• Symbol
  Gm17322
• Name
  predicted gene, 17322

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:4936956
  NCBI Gene: 100418192
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:57913095-57913683 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 31.63 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4936956	lncRNA gene	Chr9:57905324-57914734 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007440	lincRNA gene	Chr9:57254358-57265641 (+)
A/J	MGP_AJ_G0007435	lincRNA gene	Chr9:55395340-55405032 (+)
AKR/J	MGP_AKRJ_G0007408	lincRNA gene	Chr9:56690814-56703315 (+)
BALB/cJ	MGP_BALBcJ_G0007413	lincRNA gene	Chr9:55175727-55186732 (+)
C3H/HeJ	MGP_C3HHeJ_G0007357	lincRNA gene	Chr9:57159550-57168864 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007584	lincRNA gene	Chr9:58836725-58847550 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006773	lincRNA gene	Chr9:54688967-54698177 (+)
CAST/EiJ	MGP_CASTEiJ_G0007261	lincRNA gene	Chr9:57255405-57264784 (+)
CBA/J	MGP_CBAJ_G0007339	lincRNA gene	Chr9:60899997-60909350 (+)
DBA/2J	MGP_DBA2J_G0007363	lincRNA gene	Chr9:55258061-55270394 (+)
FVB/NJ	MGP_FVBNJ_G0007381	lincRNA gene	Chr9:54497242-54506888 (+)
LP/J	MGP_LPJ_G0007445	lincRNA gene	Chr9:57544593-57554401 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007361	lincRNA gene	Chr9:62387983-62400166 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007588	lincRNA gene	Chr9:56701742-56712817 (+)
PWK/PhJ	MGP_PWKPhJ_G0007202	lincRNA gene	Chr9:55299088-55309369 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007107	lincRNA gene	Chr9:56971794-56981285 (+)
WSB/EiJ	MGP_WSBEiJ_G0007321	lincRNA gene	Chr9:56635627-56648995 (+)

Homology

• Gene Tree
  Gm17322
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000097604 (Evidence)
• NCBI Gene
  100418192

Representative Sequences			Length	Strain/Species
genomic	100418192	NCBI Gene Model | MGI Sequence Detail	589	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;