Gm17473 Gene Detail

Summary

• Symbol
  Gm17473
• Name
  predicted gene, 17473

• Feature Type
  lncRNA gene
• IDs
  MGI:4937107
  NCBI Gene: 100503767
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:42539637-42568012 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 16.73 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  768 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937107	lncRNA gene	Chr15:42539637-42568012 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005596	lincRNA gene	Chr15:41264266-41294819 (+)
A/J	MGP_AJ_G0005582	lincRNA gene	Chr15:39671570-39699919 (+)
AKR/J	MGP_AKRJ_G0005561	lincRNA gene	Chr15:40860701-40889055 (+)
BALB/cJ	MGP_BALBcJ_G0005563	lincRNA gene	Chr15:39739812-39768181 (+)
C3H/HeJ	MGP_C3HHeJ_G0005510	lincRNA gene	Chr15:40759984-40789309 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005720	lincRNA gene	Chr15:42851886-42885963 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005086	lincRNA gene	Chr15:37274779-37303327 (+)
CAST/EiJ	MGP_CASTEiJ_G0005453	lincRNA gene	Chr15:41295832-41326091 (+)
CBA/J	MGP_CBAJ_G0005500	lincRNA gene	Chr15:44336315-44369496 (+)
DBA/2J	MGP_DBA2J_G0005515	lincRNA gene	Chr15:39502324-39530641 (+)
FVB/NJ	MGP_FVBNJ_G0005541	lincRNA gene	Chr15:38819653-38847969 (+)
LP/J	MGP_LPJ_G0005599	lincRNA gene	Chr15:41050892-41079069 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005526	lincRNA gene	Chr15:47421203-47452338 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005720	lincRNA gene	Chr15:41036138-41064417 (+)
PWK/PhJ	MGP_PWKPhJ_G0005403	lincRNA gene	Chr15:39539505-39568050 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005321	lincRNA gene	Chr15:40693197-40722895 (+)
WSB/EiJ	MGP_WSBEiJ_G0005503	lincRNA gene	Chr15:40931220-40959534 (+)

Homology

• Gene Tree
  Gm17473
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm17473
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000097805 (Evidence)
• NCBI Gene
  100503767

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097805	Ensembl Gene Model | MGI Sequence Detail	28376	C57BL/6J
transcript	ENSMUST00000180585	Ensembl | MGI Sequence Detail	2216	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6