Gm17669 Pseudogene Detail

Summary

• Symbol
  Gm17669
• Name
  predicted gene, 17669

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:4937303
  NCBI Gene: 108168363
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:67695464-67695905 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 40.02 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937303	pseudogene	Chr18:67692079-67696007 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	MGP_AKRJ_G0024464	protein coding gene	Chr18:66801577-66803745 (+)
BALB/cJ	MGP_BALBcJ_G0024493	protein coding gene	Chr18:65067822-65068151 (+)
C3H/HeJ	MGP_C3HHeJ_G0024261	protein coding gene	Chr18:66955239-66958107 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0024356	protein coding gene	Chr18:73311463-73323795 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0024987	protein coding gene	Chr18:66966313-66966802 (+)
PWK/PhJ	MGP_PWKPhJ_G0023478	protein coding gene	Chr18:64828795-64829419 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0023282	protein coding gene	Chr18:67128064-67130137 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm17669
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13
• RefSeq
  2

• Ensembl
  ENSMUSG00000091695 (Evidence)
• NCBI Gene
  108168363

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091695	Ensembl Gene Model | MGI Sequence Detail	442	C57BL/6J
transcript	ENSMUST00000163749	Ensembl | MGI Sequence Detail	442	Not Applicable
polypeptide	XP_036017248	RefSeq | MGI Sequence Detail	193	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;