Gm17036 Gene Detail

Summary

• Symbol
  Gm17036
• Name
  predicted gene 17036

• Feature Type
  lncRNA gene
• IDs
  MGI:4937863
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:6213913-6227324 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 4.46 cM

Strain
Comparison

• SNPs within 2kb
  362 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937863	lncRNA gene	Chr18:6213913-6227324 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003428	antisense lncRNA gene	Chr18:3103091-3116461 (+)
A/J	MGP_AJ_G0003406	antisense lncRNA gene	Chr18:3094148-3107550 (+)
AKR/J	MGP_AKRJ_G0003387	antisense lncRNA gene	Chr18:3164647-3180896 (+)
BALB/cJ	MGP_BALBcJ_G0003395	antisense lncRNA gene	Chr18:3071818-3085196 (+)
C3H/HeJ	MGP_C3HHeJ_G0003345	antisense lncRNA gene	Chr18:3066030-3079408 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003535	antisense lncRNA gene	Chr18:3302116-3315507 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003048	antisense lncRNA gene	Chr18:2872945-2886093 (+)
CAST/EiJ	MGP_CASTEiJ_G0003307	antisense lncRNA gene	Chr18:3110161-3123567 (+)
CBA/J	MGP_CBAJ_G0003341	antisense lncRNA gene	Chr18:3235539-3248905 (+)
DBA/2J	MGP_DBA2J_G0003350	antisense lncRNA gene	Chr18:3001741-3015144 (+)
FVB/NJ	MGP_FVBNJ_G0003368	antisense lncRNA gene	Chr18:2976037-2989424 (+)
LP/J	MGP_LPJ_G0003422	antisense lncRNA gene	Chr18:3117873-3131325 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003356	antisense lncRNA gene	Chr18:3301130-3314554 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003537	antisense lncRNA gene	Chr18:3040445-3053845 (+)
PWK/PhJ	MGP_PWKPhJ_G0003266	antisense lncRNA gene	Chr18:3000748-3014222 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003210	antisense lncRNA gene	Chr18:3350766-3364137 (+)
WSB/EiJ	MGP_WSBEiJ_G0003343	antisense lncRNA gene	Chr18:3086951-3100350 (+)

Homology

• Gene Tree
  Gm17036
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000091165 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091165	Ensembl Gene Model | MGI Sequence Detail	13412	C57BL/6J
transcript	ENSMUST00000168187	Ensembl | MGI Sequence Detail	254	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:152068 Friedel RH, et al., EUCOMM--the European conditional mouse mutagenesis program. Brief Funct Genomic Proteomic. 2007 Sep;6(3):180-5