Gm17040 Pseudogene Detail

Summary

• Symbol
  Gm17040
• Name
  predicted gene 17040

• Feature Type
  pseudogene
• IDs
  MGI:4937867
  NCBI Gene: 100416276
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:107169636-107170522 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 57.99 cM

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937867	pseudogene	Chr9:107169634-107170522 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039758	pseudogene	Chr9:109148806-109154121 (-)
A/J	MGP_AJ_G0039757	pseudogene	Chr9:105188075-105192813 (-)
AKR/J	MGP_AKRJ_G0039682	pseudogene	Chr9:107811400-107816087 (-)
BALB/cJ	MGP_BALBcJ_G0039726	pseudogene	Chr9:104857371-104862062 (-)
C3H/HeJ	MGP_C3HHeJ_G0039385	pseudogene	Chr9:108208928-108214722 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040287	pseudogene	Chr9:112150110-112154812 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036915	pseudogene	Chr9:102616952-102621832 (-)
CAST/EiJ	MGP_CASTEiJ_G0038506	pseudogene	Chr9:108139071-108143794 (-)
CBA/J	MGP_CBAJ_G0039358	pseudogene	Chr9:116122300-116126982 (-)
DBA/2J	MGP_DBA2J_G0039554	pseudogene	Chr9:104640698-104645385 (-)
FVB/NJ	MGP_FVBNJ_G0039512	pseudogene	Chr9:103399261-103403964 (-)
LP/J	MGP_LPJ_G0039593	pseudogene	Chr9:109356941-109361649 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039512	pseudogene	Chr9:117711480-117716170 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040394	pseudogene	Chr9:108075554-108080270 (-)
PWK/PhJ	MGP_PWKPhJ_G0038182	pseudogene	Chr9:104953669-104959057 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037928	pseudogene	Chr9:108141461-108146118 (-)
WSB/EiJ	MGP_WSBEiJ_G0038740	pseudogene	Chr9:107963246-107967952 (-)

Homology

• Gene Tree
  Gm17040
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000091366 (Evidence)
• NCBI Gene
  100416276

Representative Sequences			Length	Strain/Species
genomic	100416276	NCBI Gene Model | MGI Sequence Detail	887	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;