Gm17056 Gene Detail

Summary

• Symbol
  Gm17056
• Name
  predicted gene 17056

• Feature Type
  lncRNA gene
• IDs
  MGI:4937883
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:40248655-40251104 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 18.06 cM

Strain
Comparison

• SNPs within 2kb
  199 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937883	lncRNA gene	Chr12:40248655-40251104 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003133	antisense lncRNA gene	Chr12:38611232-38613681 (+)
A/J	MGP_AJ_G0003110	antisense lncRNA gene	Chr12:37344844-37347293 (+)
AKR/J	MGP_AKRJ_G0003090	antisense lncRNA gene	Chr12:38472863-38475312 (+)
BALB/cJ	MGP_BALBcJ_G0003097	antisense lncRNA gene	Chr12:37559528-37561977 (+)
C3H/HeJ	MGP_C3HHeJ_G0003053	antisense lncRNA gene	Chr12:38410301-38412750 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003240	antisense lncRNA gene	Chr12:39775611-39778060 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002774	antisense lncRNA gene	Chr12:36475494-36477982 (+)
CAST/EiJ	MGP_CASTEiJ_G0003022	antisense lncRNA gene	Chr12:33595913-33598354 (+)
CBA/J	MGP_CBAJ_G0003050	antisense lncRNA gene	Chr12:41127905-41130354 (+)
DBA/2J	MGP_DBA2J_G0003055	antisense lncRNA gene	Chr12:37201775-37204829 (+)
FVB/NJ	MGP_FVBNJ_G0003075	antisense lncRNA gene	Chr12:36831797-36834246 (+)
LP/J	MGP_LPJ_G0003130	antisense lncRNA gene	Chr12:38595231-38597680 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003064	antisense lncRNA gene	Chr12:41283500-41285949 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003244	antisense lncRNA gene	Chr12:38031995-38034444 (+)
PWK/PhJ	MGP_PWKPhJ_G0002980	antisense lncRNA gene	Chr12:31879290-31881734 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002924	antisense lncRNA gene	Chr12:32686537-32689016 (+)
WSB/EiJ	MGP_WSBEiJ_G0003053	antisense lncRNA gene	Chr12:38339689-38342138 (+)

Homology

• Gene Tree
  Gm17056
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000090387 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090387	Ensembl Gene Model | MGI Sequence Detail	2450	C57BL/6J
transcript	ENSMUST00000164804	Ensembl | MGI Sequence Detail	2299	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;