Gm17059 Gene Detail

Summary

• Symbol
  Gm17059
• Name
  predicted gene 17059

• Feature Type
  lncRNA gene
• IDs
  MGI:4937886
  NCBI Gene: 102640356
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:59635024-59636076 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 29.62 cM

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937886	lncRNA gene	Chr10:59635021-59636076 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002856	antisense lncRNA gene	Chr10:58983469-58984446 (-)
A/J	MGP_AJ_G0002833	antisense lncRNA gene	Chr10:57259172-57260161 (-)
AKR/J	MGP_AKRJ_G0002813	antisense lncRNA gene	Chr10:58725569-58726558 (-)
BALB/cJ	MGP_BALBcJ_G0002820	antisense lncRNA gene	Chr10:57338946-57339977 (-)
C3H/HeJ	MGP_C3HHeJ_G0002777	antisense lncRNA gene	Chr10:58661846-58662914 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002963	antisense lncRNA gene	Chr10:61088137-61089126 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002506	antisense lncRNA gene	Chr10:54290316-54291297 (-)
CAST/EiJ	MGP_CASTEiJ_G0002749	antisense lncRNA gene	Chr10:58596640-58597599 (-)
CBA/J	MGP_CBAJ_G0002772	antisense lncRNA gene	Chr10:63278572-63279549 (-)
DBA/2J	MGP_DBA2J_G0002779	antisense lncRNA gene	Chr10:56570661-56571650 (-)
FVB/NJ	MGP_FVBNJ_G0002799	antisense lncRNA gene	Chr10:55804896-55805879 (-)
LP/J	MGP_LPJ_G0002855	antisense lncRNA gene	Chr10:59354485-59355474 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002789	antisense lncRNA gene	Chr10:65783178-65784161 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002966	antisense lncRNA gene	Chr10:58546276-58547265 (-)
PWK/PhJ	MGP_PWKPhJ_G0002707	antisense lncRNA gene	Chr10:56379489-56380458 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002657	antisense lncRNA gene	Chr10:57891921-57892893 (-)
WSB/EiJ	MGP_WSBEiJ_G0002778	antisense lncRNA gene	Chr10:58465273-58466240 (-)

Homology

• Gene Tree
  Gm17059
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm17059
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000091184 (Evidence)
• NCBI Gene
  102640356

Representative Sequences			Length	Strain/Species
genomic	102640356	NCBI Gene Model | MGI Sequence Detail	1053	C57BL/6J
transcript	NR_155871	RefSeq | MGI Sequence Detail	516	Not Specified

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 11

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Gm17059:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr97676	Chr10:59636086-59636095 (-)	-15 bp