Gm17070 Pseudogene Detail

Summary

• Symbol
  Gm17070
• Name
  predicted gene 17070

• Feature Type
  pseudogene
• IDs
  MGI:4937897
  NCBI Gene: 100417311
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:45042158-45042941 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 22.57 cM

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937897	pseudogene	Chr14:45041977-45042941 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011097	pseudogene	Chr14:38484194-38484977 (+)
A/J	MGP_AJ_G0011093	pseudogene	Chr14:37204609-37205369 (-)
AKR/J	MGP_AKRJ_G0011050	pseudogene	Chr14:38687014-38687782 (-)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0010968	pseudogene	Chr14:38640303-38641468 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011353	pseudogene	Chr14:40149197-40149980 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010783	pseudogene	Chr14:35742851-35743635 (+)
CBA/J	MGP_CBAJ_G0010941	pseudogene	Chr14:41423230-41432356 (+)
DBA/2J	MGP_DBA2J_G0010989	pseudogene	Chr14:37158823-37159563 (-)
FVB/NJ	MGP_FVBNJ_G0010998	pseudogene	Chr14:37039618-37045074 (+)
LP/J	MGP_LPJ_G0011074	pseudogene	Chr14:38823193-38823977 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010984	pseudogene	Chr14:40822229-40827192 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011335	pseudogene	Chr14:38385363-38386147 (+)
PWK/PhJ	MGP_PWKPhJ_G0010656	pseudogene	Chr14:34139842-34140626 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010478	pseudogene	Chr14:34508150-34508932 (-)
WSB/EiJ	MGP_WSBEiJ_G0010836	pseudogene	Chr14:38309238-38310223 (-)

Homology

• Gene Tree
  Gm17070
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm17070
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000090365 (Evidence)
• NCBI Gene
  100417311

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090365	Ensembl Gene Model | MGI Sequence Detail	784	C57BL/6J
transcript	ENSMUST00000170463	Ensembl | MGI Sequence Detail	784	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;