Gm17098 Gene Detail

Summary

• Symbol
  Gm17098
• Name
  predicted gene 17098

• Feature Type
  lncRNA gene
• IDs
  MGI:4937925
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:66741981-66742816 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 36.16 cM

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937925	lncRNA gene	Chr9:66741981-66742816 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004640	antisense lncRNA gene	Chr9:66714329-66715172 (+)
A/J	MGP_AJ_G0004621	antisense lncRNA gene	Chr9:64398834-64399669 (+)
AKR/J	MGP_AKRJ_G0004604	antisense lncRNA gene	Chr9:65933389-65934224 (+)
BALB/cJ	MGP_BALBcJ_G0004605	antisense lncRNA gene	Chr9:64131667-64132502 (+)
C3H/HeJ	MGP_C3HHeJ_G0004554	antisense lncRNA gene	Chr9:66469023-66469858 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004755	antisense lncRNA gene	Chr9:68533286-68534121 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004206	antisense lncRNA gene	Chr9:64033812-64034673 (+)
CAST/EiJ	MGP_CASTEiJ_G0004512	antisense lncRNA gene	Chr9:66696904-66697747 (+)
CBA/J	MGP_CBAJ_G0004548	antisense lncRNA gene	Chr9:70878830-70879665 (+)
DBA/2J	MGP_DBA2J_G0004563	antisense lncRNA gene	Chr9:64170420-64171254 (+)
FVB/NJ	MGP_FVBNJ_G0004581	antisense lncRNA gene	Chr9:63511861-63512705 (+)
LP/J	MGP_LPJ_G0004644	antisense lncRNA gene	Chr9:66983380-66984223 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004569	antisense lncRNA gene	Chr9:72106434-72107268 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004754	antisense lncRNA gene	Chr9:66049596-66050430 (+)
PWK/PhJ	MGP_PWKPhJ_G0004465	antisense lncRNA gene	Chr9:64397871-64398715 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004405	antisense lncRNA gene	Chr9:66364033-66364869 (+)
WSB/EiJ	MGP_WSBEiJ_G0004553	antisense lncRNA gene	Chr9:65948840-65949683 (+)

Homology

• Gene Tree
  Gm17098
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm17098
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000091745 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091745	Ensembl Gene Model | MGI Sequence Detail	836	C57BL/6J
transcript	ENSMUST00000166507	Ensembl | MGI Sequence Detail	628	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;