Gm17109 Pseudogene Detail

Summary

• Symbol
  Gm17109
• Name
  predicted gene 17109

• Feature Type
  pseudogene
• IDs
  MGI:4937936
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:58343229-58343586 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 30.51 cM

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937936	pseudogene	Chr14:58343229-58343586 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011122	pseudogene	Chr14:52346207-52346564 (-)
A/J	MGP_AJ_G0011118	pseudogene	Chr14:51278912-51279269 (-)
AKR/J	MGP_AKRJ_G0011077	pseudogene	Chr14:53068948-53069305 (-)
BALB/cJ	MGP_BALBcJ_G0011088	pseudogene	Chr14:51221478-51221835 (-)
C3H/HeJ	MGP_C3HHeJ_G0010988	pseudogene	Chr14:52738707-52739064 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011381	pseudogene	Chr14:54903965-54904322 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009955	pseudogene	Chr14:49357254-49357611 (-)
CAST/EiJ	MGP_CASTEiJ_G0010807	pseudogene	Chr14:49084590-49084947 (-)
CBA/J	MGP_CBAJ_G0010965	pseudogene	Chr14:56526664-56527021 (-)
DBA/2J	MGP_DBA2J_G0011012	pseudogene	Chr14:50947804-50948161 (-)
FVB/NJ	MGP_FVBNJ_G0011016	pseudogene	Chr14:50345812-50346169 (-)
LP/J	MGP_LPJ_G0011101	pseudogene	Chr14:53371596-53371953 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011006	pseudogene	Chr14:55885387-55885744 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011358	pseudogene	Chr14:52220121-52220478 (-)
PWK/PhJ	MGP_PWKPhJ_G0010676	pseudogene	Chr14:47500101-47500458 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010500	pseudogene	Chr14:48311245-48311602 (-)
WSB/EiJ	MGP_WSBEiJ_G0010854	pseudogene	Chr14:52539184-52539541 (-)

Homology

• Gene Tree
  Gm17109
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm17109
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000091132 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091132	Ensembl Gene Model | MGI Sequence Detail	358	C57BL/6J
transcript	ENSMUST00000163985	Ensembl | MGI Sequence Detail	358	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;