Gm17115 Gene Detail

Summary

• Symbol
  Gm17115
• Name
  predicted gene 17115

• Feature Type
  lncRNA gene
• IDs
  MGI:4937942
  NCBI Gene: 102632854
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:33007368-33008565 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 17.96 cM

Strain
Comparison

• SNPs within 2kb
  155 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937942	lncRNA gene	Chr17:33007368-33009413 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003389	antisense lncRNA gene	Chr17:32670020-32671217 (+)
A/J	MGP_AJ_G0003366	antisense lncRNA gene	Chr17:31583651-31584848 (+)
AKR/J	MGP_AKRJ_G0003349	antisense lncRNA gene	Chr17:31886234-31887431 (+)
BALB/cJ	MGP_BALBcJ_G0003355	antisense lncRNA gene	Chr17:31684805-31686002 (+)
C3H/HeJ	MGP_C3HHeJ_G0003307	antisense lncRNA gene	Chr17:32290457-32291654 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003496	antisense lncRNA gene	Chr17:33773252-33774451 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003011	antisense lncRNA gene	Chr17:28850218-28851408 (+)
CAST/EiJ	MGP_CASTEiJ_G0003270	antisense lncRNA gene	Chr17:32378573-32379765 (+)
CBA/J	MGP_CBAJ_G0003303	antisense lncRNA gene	Chr17:35294738-35295935 (+)
DBA/2J	MGP_DBA2J_G0003310	antisense lncRNA gene	Chr17:30963785-30964988 (+)
FVB/NJ	MGP_FVBNJ_G0003328	antisense lncRNA gene	Chr17:30781938-30783121 (+)
LP/J	MGP_LPJ_G0003383	antisense lncRNA gene	Chr17:32872707-32873904 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003316	antisense lncRNA gene	Chr17:34285426-34286609 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003498	antisense lncRNA gene	Chr17:32246342-32247539 (+)
PWK/PhJ	MGP_PWKPhJ_G0003229	antisense lncRNA gene	Chr17:29884218-29885409 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003173	antisense lncRNA gene	Chr17:30229725-30230926 (+)
WSB/EiJ	MGP_WSBEiJ_G0003304	antisense lncRNA gene	Chr17:32264519-32265716 (+)

Homology

• Gene Tree
  Gm17115
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  5
• Gene trapped
  5
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000091968 (Evidence)
• NCBI Gene
  102632854

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091968	Ensembl Gene Model | MGI Sequence Detail	1198	C57BL/6J
transcript	ENSMUST00000164075	Ensembl | MGI Sequence Detail	885	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9