Gm17118 Gene Detail

Summary

• Symbol
  Gm17118
• Name
  predicted gene 17118

• Feature Type
  lncRNA gene
• IDs
  MGI:4937945
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:107321149-107322230 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 58.04 cM

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937945	lncRNA gene	Chr9:107321149-107322230 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004686	antisense lncRNA gene	Chr9:109310143-109311235 (-)
A/J	MGP_AJ_G0004667	antisense lncRNA gene	Chr9:105338777-105339869 (-)
AKR/J	MGP_AKRJ_G0004650	antisense lncRNA gene	Chr9:107964581-107965673 (-)
BALB/cJ	MGP_BALBcJ_G0004651	antisense lncRNA gene	Chr9:105008881-105009973 (-)
C3H/HeJ	MGP_C3HHeJ_G0004600	antisense lncRNA gene	Chr9:108368422-108369514 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004801	antisense lncRNA gene	Chr9:112308681-112309762 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004245	antisense lncRNA gene	Chr9:102768849-102769945 (-)
CAST/EiJ	MGP_CASTEiJ_G0004556	antisense lncRNA gene	Chr9:108300357-108301450 (-)
CBA/J	MGP_CBAJ_G0004594	antisense lncRNA gene	Chr9:116281843-116282924 (-)
DBA/2J	MGP_DBA2J_G0004609	antisense lncRNA gene	Chr9:104793645-104794723 (-)
FVB/NJ	MGP_FVBNJ_G0004627	antisense lncRNA gene	Chr9:103556359-103557451 (-)
LP/J	MGP_LPJ_G0004690	antisense lncRNA gene	Chr9:109517010-109518102 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004614	antisense lncRNA gene	Chr9:117875562-117876654 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004800	antisense lncRNA gene	Chr9:108238285-108239377 (-)
PWK/PhJ	MGP_PWKPhJ_G0004509	antisense lncRNA gene	Chr9:105111336-105112777 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004446	antisense lncRNA gene	Chr9:108298158-108299226 (-)
WSB/EiJ	MGP_WSBEiJ_G0004599	antisense lncRNA gene	Chr9:108121654-108122750 (-)

Homology

• Gene Tree
  Gm17118
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000091425 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091425	Ensembl Gene Model | MGI Sequence Detail	1082	C57BL/6J
transcript	ENSMUST00000164032	Ensembl | MGI Sequence Detail	335	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;