Gm17157 Pseudogene Detail

Summary

• Symbol
  Gm17157
• Name
  predicted gene 17157

• Feature Type
  pseudogene
• IDs
  MGI:4937984
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:121076383-121076730 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 72.38 cM

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937984	pseudogene	Chr9:121076383-121076730 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014264	pseudogene	Chr9:124171292-124171639 (+)
A/J	MGP_AJ_G0014280	pseudogene	Chr9:119451989-119452338 (+)
AKR/J	MGP_AKRJ_G0014205	pseudogene	Chr9:122621308-122621657 (+)
BALB/cJ	MGP_BALBcJ_G0014230	pseudogene	Chr9:119363396-119363745 (+)
C3H/HeJ	MGP_C3HHeJ_G0014061	pseudogene	Chr9:123082905-123083254 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014684	pseudogene	Chr9:127540995-127541342 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012492	pseudogene	Chr9:116621427-116621771 (+)
CAST/EiJ	MGP_CASTEiJ_G0013713	pseudogene	Chr9:123124178-123124527 (+)
CBA/J	MGP_CBAJ_G0014043	pseudogene	Chr9:132217195-132217544 (+)
DBA/2J	MGP_DBA2J_G0014127	pseudogene	Chr9:118900645-118900994 (+)
FVB/NJ	MGP_FVBNJ_G0014126	pseudogene	Chr9:117811050-117811399 (+)
LP/J	MGP_LPJ_G0014218	pseudogene	Chr9:124499082-124499429 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014160	pseudogene	Chr9:133195284-133195631 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014653	pseudogene	Chr9:123060972-123061319 (+)
PWK/PhJ	MGP_PWKPhJ_G0013528	pseudogene	Chr9:119356458-119356794 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013319	pseudogene	Chr9:123096006-123096336 (+)
WSB/EiJ	MGP_WSBEiJ_G0013775	pseudogene	Chr9:122898443-122898792 (+)

Homology

• Gene Tree
  Gm17157
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000091336 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091336	Ensembl Gene Model | MGI Sequence Detail	348	C57BL/6J
transcript	ENSMUST00000172397	Ensembl | MGI Sequence Detail	348	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;