Gm17168 Gene Detail

Summary

• Symbol
  Gm17168
• Name
  predicted gene 17168

• Feature Type
  lncRNA gene
• IDs
  MGI:4937995
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:57348775-57354143 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 29.64 cM

Strain
Comparison

• SNPs within 2kb
  214 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937995	lncRNA gene	Chr17:57348775-57354143 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003417	antisense lncRNA gene	Chr17:58789112-58794041 (+)
A/J	MGP_AJ_G0003395	antisense lncRNA gene	Chr17:57162970-57169870 (+)
AKR/J	MGP_AKRJ_G0003376	antisense lncRNA gene	Chr17:57889234-57894536 (+)
BALB/cJ	MGP_BALBcJ_G0003384	antisense lncRNA gene	Chr17:57004866-57010588 (+)
C3H/HeJ	MGP_C3HHeJ_G0003334	antisense lncRNA gene	Chr17:58608880-58615325 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003524	antisense lncRNA gene	Chr17:61057060-61063338 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003038	antisense lncRNA gene	Chr17:53644051-53649356 (+)
CAST/EiJ	MGP_CASTEiJ_G0003296	antisense lncRNA gene	Chr17:58900913-58906676 (+)
CBA/J	MGP_CBAJ_G0003330	antisense lncRNA gene	Chr17:63452411-63457700 (+)
DBA/2J	MGP_DBA2J_G0003339	antisense lncRNA gene	Chr17:55860523-55867033 (+)
FVB/NJ	MGP_FVBNJ_G0003357	antisense lncRNA gene	Chr17:55433246-55439906 (+)
LP/J	MGP_LPJ_G0003411	antisense lncRNA gene	Chr17:59466798-59472450 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003345	antisense lncRNA gene	Chr17:62909910-62914842 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003526	antisense lncRNA gene	Chr17:58247369-58252762 (+)
PWK/PhJ	MGP_PWKPhJ_G0003255	antisense lncRNA gene	Chr17:55229791-55235329 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003200	antisense lncRNA gene	Chr17:55018478-55023437 (+)
WSB/EiJ	MGP_WSBEiJ_G0003333	antisense lncRNA gene	Chr17:58867268-58872716 (+)

Homology

• Gene Tree
  Gm17168
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000091390 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091390	Ensembl Gene Model | MGI Sequence Detail	5369	C57BL/6J
transcript	ENSMUST00000169146	Ensembl | MGI Sequence Detail	345	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;