Gm17190 Pseudogene Detail

Summary

• Symbol
  Gm17190
• Name
  predicted gene 17190

• Feature Type
  pseudogene
• IDs
  MGI:4938017
  NCBI Gene: 100417936
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:96218562-96219410 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 50.49 cM

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4938017	pseudogene	Chr13:96218512-96219620 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0020847	protein coding gene	Chr13:97582546-97583387 (+)
A/J	MGP_AJ_G0020801	protein coding gene	Chr13:93923339-93924508 (+)
AKR/J	MGP_AKRJ_G0020775	protein coding gene	Chr13:96797123-96797971 (+)
BALB/cJ	MGP_BALBcJ_G0020798	protein coding gene	Chr13:94605704-94607116 (+)
C3H/HeJ	MGP_C3HHeJ_G0020591	protein coding gene	Chr13:96489973-96490821 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0029796	protein coding gene	Chr7:54661095-54661933 (+)
CAST/EiJ	MGP_CASTEiJ_G0031338	protein coding gene	Chr7:44563147-44563986 (+)
CBA/J	MGP_CBAJ_G0020550	protein coding gene	Chr13:104526363-104527532 (+)
DBA/2J	MGP_DBA2J_G0020675	protein coding gene	Chr13:93698120-93699289 (+)
FVB/NJ	MGP_FVBNJ_G0020656	protein coding gene	Chr13:92481747-92482924 (+)
LP/J	MGP_LPJ_G0020750	protein coding gene	Chr13:97725101-97726513 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0020684	protein coding gene	Chr13:104953936-104955113 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0021274	protein coding gene	Chr13:96201837-96204787 (+)
PWK/PhJ	MGP_PWKPhJ_G0031058	protein coding gene	Chr7:44113393-44115037 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0030899	protein coding gene	Chr7:39989161-39990001 (+)
WSB/EiJ	MGP_WSBEiJ_G0031456	protein coding gene	Chr7:52513949-52514789 (+)

Homology

• Gene Tree
  Gm17190
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000099115 (Evidence)
• NCBI Gene
  100417936

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099115	Ensembl Gene Model | MGI Sequence Detail	849	C57BL/6J
transcript	ENSMUST00000184369	Ensembl | MGI Sequence Detail	849	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;