Gm17195 Pseudogene Detail

Summary

• Symbol
  Gm17195
• Name
  predicted gene 17195

• Feature Type
  pseudogene
• IDs
  MGI:4938022
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:79210182-79210609 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 35.51 cM

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4938022	pseudogene	Chr12:79210182-79210609 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010921	pseudogene	Chr12:79443745-79444172 (-)
A/J	MGP_AJ_G0010928	pseudogene	Chr12:76588021-76588448 (-)
AKR/J	MGP_AKRJ_G0010881	pseudogene	Chr12:78661911-78662338 (-)
BALB/cJ	MGP_BALBcJ_G0010901	pseudogene	Chr12:76842377-76842804 (-)
C3H/HeJ	MGP_C3HHeJ_G0010797	pseudogene	Chr12:79137729-79138156 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011172	pseudogene	Chr12:81792672-81793099 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009784	pseudogene	Chr12:73604718-73605148 (-)
CAST/EiJ	MGP_CASTEiJ_G0010630	pseudogene	Chr12:73971624-73972051 (-)
CBA/J	MGP_CBAJ_G0010772	pseudogene	Chr12:84987023-84987450 (-)
DBA/2J	MGP_DBA2J_G0010819	pseudogene	Chr12:76211542-76211969 (-)
FVB/NJ	MGP_FVBNJ_G0010832	pseudogene	Chr12:75024794-75025221 (-)
LP/J	MGP_LPJ_G0010903	pseudogene	Chr12:79377518-79377945 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010813	pseudogene	Chr12:88023338-88023765 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011157	pseudogene	Chr12:78178633-78179060 (-)
PWK/PhJ	MGP_PWKPhJ_G0010520	pseudogene	Chr12:70571112-70571539 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010332	pseudogene	Chr12:72681685-72682112 (-)
WSB/EiJ	MGP_WSBEiJ_G0010674	pseudogene	Chr12:78797008-78797435 (-)

Homology

• Gene Tree
  Gm17195
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm17195
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000091534 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091534	Ensembl Gene Model | MGI Sequence Detail	428	C57BL/6J
transcript	ENSMUST00000170289	Ensembl | MGI Sequence Detail	428	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm17195:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr116823	Chr12:79211820-79211831 (-)	-1,217 bp