Gm17201 Gene Detail

Summary

• Symbol
  Gm17201
• Name
  predicted gene 17201

• Feature Type
  lncRNA gene
• IDs
  MGI:4938028
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:128227711-128231432 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 76.54 cM

Strain
Comparison

• SNPs within 2kb
  65 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4938028	lncRNA gene	Chr10:128227711-128231432 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002911	antisense lncRNA gene	Chr10:132125547-132129273 (-)
A/J	MGP_AJ_G0002888	antisense lncRNA gene	Chr10:126818221-126821947 (-)
AKR/J	MGP_AKRJ_G0002869	antisense lncRNA gene	Chr10:130541683-130545409 (-)
BALB/cJ	MGP_BALBcJ_G0002876	antisense lncRNA gene	Chr10:127201212-127204938 (-)
C3H/HeJ	MGP_C3HHeJ_G0002832	antisense lncRNA gene	Chr10:130705093-130708819 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003019	antisense lncRNA gene	Chr10:136602996-136606717 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002561	antisense lncRNA gene	Chr10:120752779-120756484 (-)
CAST/EiJ	MGP_CASTEiJ_G0002804	antisense lncRNA gene	Chr10:131415014-131418729 (-)
CBA/J	MGP_CBAJ_G0002828	antisense lncRNA gene	Chr10:142149659-142153385 (-)
DBA/2J	MGP_DBA2J_G0002835	antisense lncRNA gene	Chr10:125879676-125883277 (-)
FVB/NJ	MGP_FVBNJ_G0002854	antisense lncRNA gene	Chr10:124808928-124812644 (-)
LP/J	MGP_LPJ_G0002911	antisense lncRNA gene	Chr10:132718145-132721871 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002843	antisense lncRNA gene	Chr10:144755200-144758921 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003022	antisense lncRNA gene	Chr10:130641711-130645432 (-)
PWK/PhJ	MGP_PWKPhJ_G0002762	antisense lncRNA gene	Chr10:126139704-126143463 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002710	antisense lncRNA gene	Chr10:129736050-129739768 (-)
WSB/EiJ	MGP_WSBEiJ_G0002833	antisense lncRNA gene	Chr10:130857541-130861263 (-)

Homology

• Gene Tree
  Gm17201
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000090761 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090761	Ensembl Gene Model | MGI Sequence Detail	3722	C57BL/6J
transcript	ENSMUST00000167226	Ensembl | MGI Sequence Detail	390	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;