Gm17215 Gene Detail

Summary

• Symbol
  Gm17215
• Name
  predicted gene 17215

• Feature Type
  lncRNA gene
• IDs
  MGI:4938042
  NCBI Gene: 102632928
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:7431015-7478569 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 2.65 cM

Strain
Comparison

• SNPs within 2kb
  1650 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4938042	lncRNA gene	Chr8:7430948-7478569 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007297	lincRNA gene	Chr8:4424019-4486299 (+)
A/J	MGP_AJ_G0007294	lincRNA gene	Chr8:4273534-4320938 (+)
AKR/J	MGP_AKRJ_G0007265	lincRNA gene	Chr8:4414228-4476205 (+)
BALB/cJ	MGP_BALBcJ_G0007272	lincRNA gene	Chr8:4392400-4454475 (+)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0007442	lincRNA gene	Chr8:4637382-4685867 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006645	lincRNA gene	Chr8:3918878-3967416 (+)
CAST/EiJ	MGP_CASTEiJ_G0007118	lincRNA gene	Chr8:4254730-4301496 (+)
CBA/J	MGP_CBAJ_G0007199	lincRNA gene	Chr8:4839604-4891784 (+)
DBA/2J	MGP_DBA2J_G0007221	lincRNA gene	Chr8:4266115-4313047 (+)
FVB/NJ	MGP_FVBNJ_G0007242	lincRNA gene	Chr8:4263150-4306367 (+)
LP/J	MGP_LPJ_G0007302	lincRNA gene	Chr8:4320541-4369055 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007219	lincRNA gene	Chr8:5221571-5275336 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007445	lincRNA gene	Chr8:4398654-4455067 (+)
PWK/PhJ	MGP_PWKPhJ_G0007060	lincRNA gene	Chr8:4218437-4269477 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0007178	lincRNA gene	Chr8:4437612-4487913 (+)

Homology

• Gene Tree
  Gm17215
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  2

• Ensembl
  ENSMUSG00000092092 (Evidence)
• NCBI Gene
  102632928

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092092	Ensembl Gene Model | MGI Sequence Detail	47555	C57BL/6J
transcript	ENSMUST00000170074	Ensembl | MGI Sequence Detail	277	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:188991 The Jackson Laboratory, Alleles produced for the KOMP project by The Jackson Laboratory. MGI Direct Data Submission. 2012;