Gm17217 Pseudogene Detail

Summary

• Symbol
  Gm17217
• Name
  predicted gene 17217

• Feature Type
  pseudogene
• IDs
  MGI:4938044
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:41222701-41223169 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 28.25 cM

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4938044	pseudogene	Chr7:41222701-41223169 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039851	pseudogene	Chr7:41310749-41311217 (-)
A/J	MGP_AJ_G0039852	pseudogene	Chr7:40384078-40384546 (-)
AKR/J	MGP_AKRJ_G0039779	pseudogene	Chr7:41668027-41668495 (-)
BALB/cJ	MGP_BALBcJ_G0039825	pseudogene	Chr7:40602334-40602802 (-)
C3H/HeJ	MGP_C3HHeJ_G0039478	pseudogene	Chr7:42266465-42266933 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040399	pseudogene	Chr7:43385995-43386463 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036980	pseudogene	Chr6:112902784-112903302 (+)
CAST/EiJ	MGP_CASTEiJ_G0038586	pseudogene	Chr7:33419068-33419527 (-)
CBA/J	MGP_CBAJ_G0039448	pseudogene	Chr7:44729887-44730355 (-)
DBA/2J	MGP_DBA2J_G0039649	pseudogene	Chr7:40271860-40272319 (-)
FVB/NJ	MGP_FVBNJ_G0039608	pseudogene	Chr7:39983655-39984123 (-)
LP/J	MGP_LPJ_G0039686	pseudogene	Chr7:41840069-41840537 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039604	pseudogene	Chr7:43566051-43566519 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040496	pseudogene	Chr7:40904104-40904572 (-)
PWK/PhJ	MGP_PWKPhJ_G0038263	pseudogene	Chr7:33381627-33382086 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038007	pseudogene	Chr7:29328376-29328836 (-)
WSB/EiJ	MGP_WSBEiJ_G0038818	pseudogene	Chr7:41335168-41335636 (-)

Homology

• Gene Tree
  Gm17217
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000090341 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090341	Ensembl Gene Model | MGI Sequence Detail	469	C57BL/6J
transcript	ENSMUST00000166613	Ensembl | MGI Sequence Detail	469	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;