Gm17224 Gene Detail

Summary

• Symbol
  Gm17224
• Name
  predicted gene 17224

• Feature Type
  lncRNA gene
• IDs
  MGI:4938051
  NCBI Gene: 102638851
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:172040588-172041247 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 79.54 cM

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4938051	lncRNA gene	Chr1:172034594-172041253 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002795	antisense lncRNA gene	Chr1:178070804-178071463 (+)
A/J	MGP_AJ_G0002772	antisense lncRNA gene	Chr1:170781230-170781889 (+)
AKR/J	MGP_AKRJ_G0002753	antisense lncRNA gene	Chr1:175943494-175944153 (+)
BALB/cJ	MGP_BALBcJ_G0002759	antisense lncRNA gene	Chr1:171328009-171328668 (+)
C3H/HeJ	MGP_C3HHeJ_G0002717	antisense lncRNA gene	Chr1:176516086-176516745 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002901	antisense lncRNA gene	Chr1:183980418-183981077 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002448	antisense lncRNA gene	Chr1:162486057-162486726 (+)
CAST/EiJ	MGP_CASTEiJ_G0002689	antisense lncRNA gene	Chr1:175877368-175878027 (+)
CBA/J	MGP_CBAJ_G0002712	antisense lncRNA gene	Chr1:190532175-190532834 (+)
DBA/2J	MGP_DBA2J_G0002719	antisense lncRNA gene	Chr1:169718144-169718803 (+)
FVB/NJ	MGP_FVBNJ_G0002739	antisense lncRNA gene	Chr1:167974224-167974883 (+)
LP/J	MGP_LPJ_G0002795	antisense lncRNA gene	Chr1:179162520-179163179 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002729	antisense lncRNA gene	Chr1:197779329-197779988 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002906	antisense lncRNA gene	Chr1:175811814-175812473 (+)
PWK/PhJ	MGP_PWKPhJ_G0002647	antisense lncRNA gene	Chr1:169093482-169094141 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002597	antisense lncRNA gene	Chr1:174761723-174762382 (+)
WSB/EiJ	MGP_WSBEiJ_G0002718	antisense lncRNA gene	Chr1:175967090-175967749 (+)

Homology

• Gene Tree
  Gm17224
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm17224
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  6

• Ensembl
  ENSMUSG00000092085 (Evidence)
• NCBI Gene
  102638851

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092085	Ensembl Gene Model | MGI Sequence Detail	660	C57BL/6J
transcript	ENSMUST00000171429	Ensembl | MGI Sequence Detail	500	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;