Gm17230 Pseudogene Detail

Summary

• Symbol
  Gm17230
• Name
  predicted gene 17230

• Feature Type
  pseudogene
• IDs
  MGI:4938057
  NCBI Gene: 100417294
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:20501381-20505322 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 9.75 cM

Strain
Comparison

• SNPs within 2kb
  286 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4938057	pseudogene	Chr10:20501381-20505413 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010497	pseudogene	Chr10:18391189-18395130 (+)
A/J	MGP_AJ_G0010487	pseudogene	Chr10:17686037-17689978 (+)
AKR/J	MGP_AKRJ_G0010453	pseudogene	Chr10:17996431-18000092 (+)
BALB/cJ	MGP_BALBcJ_G0010460	pseudogene	Chr10:17751705-17755646 (+)
C3H/HeJ	MGP_C3HHeJ_G0010392	pseudogene	Chr10:18319014-18322955 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010732	pseudogene	Chr10:18841511-18845452 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010209	pseudogene	Chr10:18215135-18219077 (+)
CBA/J	MGP_CBAJ_G0010358	pseudogene	Chr10:19706663-19710604 (+)
DBA/2J	MGP_DBA2J_G0010389	pseudogene	Chr10:17568159-17572100 (+)
FVB/NJ	MGP_FVBNJ_G0010413	pseudogene	Chr10:17317029-17320970 (+)
LP/J	MGP_LPJ_G0010479	pseudogene	Chr10:18195561-18199502 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010378	pseudogene	Chr10:19932503-19936444 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010703	pseudogene	Chr10:17989375-17993316 (+)
PWK/PhJ	MGP_PWKPhJ_G0010111	pseudogene	Chr10:17455637-17459590 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009926	pseudogene	Chr10:18135445-18139376 (+)
WSB/EiJ	MGP_WSBEiJ_G0010280	pseudogene	Chr10:18078271-18082220 (+)

Homology

• Gene Tree
  Gm17230
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm17230
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000091730 (Evidence)
• NCBI Gene
  100417294

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091730	Ensembl Gene Model | MGI Sequence Detail	3942	C57BL/6J
transcript	ENSMUST00000171194	Ensembl | MGI Sequence Detail	3942	Not Applicable

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87